Hs01058553_m1

• Gene Symbol: APOBEC3B
• Gene Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3B
• Gene Aliases: A3B, APOBEC1L, ARCD3, ARP4, DJ742C19.2, PHRBNL, bK150C2.2
• Chromosome Location: Chr.22: 38982399 - 38992779 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: APOBEC3B
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001270411.1	NP_001257340.1	2 - 3			82
	NM_004900.4	NP_004891.4	2 - 3			82
GenBank mRNA	AK024854.1	-	2 - 3			82
	AU098564.1	-	2 - 3			82
	AY743217.1	-	2 - 3			82
	BC053859.1	-	2 - 3	254	6174285	82
	CT841510.1	-	2 - 3	198		82
	KF651167.1	-	2 - 3	173		82
	U61084.1	-	2 - 3	202		98

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200009270.hg.1
This assay targets the same location as HTA transcript cluster(s) TC22001425.hg.1

Additional Information:

This assay is in the 5'UTR region of the U61084.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene APOBEC3B

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

negative regulation of transposition
innate immune response
defense response to virus

Function(s)

zinc ion binding
poly(A) RNA binding
deoxycytidine deaminase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR22005764.hg.1	TC22001425.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22005764.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005764.hg.1	ENST00000402182.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005764.hg.1	ENST00000407298.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005764.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22005761.hg.1	TC22001425.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22005761.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005761.hg.1	ENST00000402182.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005761.hg.1	ENST00000407298.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005761.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22005763.hg.1	TC22001425.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22005763.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005763.hg.1	ENST00000402182.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005763.hg.1	ENST00000407298.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22005763.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	TC2200009270.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200168862.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	TC2200009270.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200168861.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	TC2200009270.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200168859.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000333467.3	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000335760.9	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000402182.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	ENST00000407298.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_001270411.1	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq
Affymetrix Human Clariom D Assay	TC2200009270.hg.1	NM_004900.4	Refseq