Hs01060526_m1

• Gene Symbol: PGAP2
• Gene Name: post-GPI attachment to proteins 2
• Gene Aliases: CWH43-N, FRAG1, HPMRS3, MRT17, MRT21
• Chromosome Location: Chr.11: 3797724 - 3826371 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PGAP2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027017.2		2 - 3	170		79
	XM_006718186.2	XP_006718249.1	2 - 3	167		79
	XM_011519998.2	XP_011518300.1	2 - 3	86		79
	XM_011520004.2	XP_011518306.1	2 - 3	83		79
	XM_011520007.2	XP_011518309.1	2 - 3	103		79
	XM_017017557.1	XP_016873046.1	2 - 3	215		79
GenBank mRNA	AK301991.1	-	2 - 3	140		79
	BI460657.1	-	2 - 3	176		79

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	HY005082.1	-	2 - 3	103		Chr. 11 - 3798026 - 3823693 [+] on Build GRCh38	79
GenBankmRNA	CD300100.1	-	2 - 3	138		Chr. 11 - 3798017 - 3824357 [+] on Build GRCh38	79
GenBankmRNA	DC396630.1	-	2 - 3	140		Chr. 11 - 3797989 - 3824033 [+] on Build GRCh38	79
GenBankmRNA	HY005545.1	-	2 - 3	167		Chr. 11 - 3797962 - 3823964 [+] on Build GRCh38	79
GenBankmRNA	DB446264.1	-				Chr. - - [-] on Build	79

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	nucleoporin 98	NUP98	ADIR2, NUP196, NUP96	-10.5kb	Anti-sense	Chr. 11 - 3675010 - 3797792 on NCBI Build GRCh38
Downstream	ras homolog family member G	RHOG	ARHG	15.6kb	Anti-sense	Chr. 11 - 3826978 - 3840983 on NCBI Build GRCh38

More Information

Additional Information:

This assay is in the 5'UTR region of the AK301991.1, XM_006718186.2, XM_011519998.2, XM_011520004.2, XM_011520007.2 transcripts.

• Set Membership: Amplicon length between 71 and 85, Homo sapiens, Probe spans exons

Panther Classification:

Molecular Function -

protein modifying enzyme

Gene Ontology Categories:

Process(es)

GPI anchor biosynthetic process
protein transport
signal transduction in response to DNA damage
intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Function(s)

protein binding
protein transporter activity