Hs01064347_m1

• Gene Symbol: TRNT1
• Gene Name: tRNA nucleotidyl transferase 1
• Gene Aliases: CCA1, CGI-47, MtCCA, RPEM, SIFD
• Chromosome Location: Chr.3: 3126916 - 3153435 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TRNT1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001302946.1	NP_001289875.1	1 - 2	78		54
	NM_182916.2	NP_886552.2	1 - 2	78		54
	XM_011533778.2	XP_011532080.1	1 - 2	78		54
GenBank mRNA	AK290411.1	-	1 - 2	43		54
	AL834397.1	-	1 - 2	42		54
	BC005184.1	-	1 - 2	43		54
	DB032432.1	-	1 - 2	78		54

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300006462.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000009.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK290411.1,AL834397.1,BC005184.1,NM_001302946.1,NM_182916.2,XM_011533778.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Homo sapiens, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TRNT1

Panther Classification:

Molecular Function -

RNA metabolism protein, RNA processing factor, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

tRNA 3'-terminal CCA addition
protein targeting to mitochondrion
tRNA 3'-end processing
mitochondrial tRNA 3'-end processing

Function(s)

tRNA binding
tRNA adenylyltransferase activity
ATP binding
RNA polymerase activity
CTP:tRNA cytidylyltransferase activity
CTP:3'-cytidine-tRNA cytidylyltransferase activity
ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000251607.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000280591.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000339437.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000339437.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000339437.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000339437.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000339437.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000339437.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000397779.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000397779.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000397779.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000397779.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000397779.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000402675.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000402675.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000402675.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000402675.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000402675.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000402675.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000402675.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000402675.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000402675.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000402675.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000413000.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000413000.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000413000.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000413000.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000413000.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000413000.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000420393.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000420393.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000420393.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000420393.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000420393.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000420393.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000420393.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000420393.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000420393.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000434583.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000465998.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000465998.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000465998.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000465998.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000469632.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000469632.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000469632.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000469632.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000469632.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000482311.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000482311.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000482311.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000482311.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000482311.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000482311.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	ENST00000607052.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_001302946.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300006462.hg.1	NM_182916.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008990.hg.1	ENST00000438230.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008990.hg.1	ENST00000438230.1	Ensembl

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	199911	-	-