Hs01065706_g1

• Gene Symbol: HCFC1
• Gene Name: host cell factor C1
• Gene Aliases: CFF, HCF, HCF-1, HCF1, HFC1, MRX3, PPP1R89, VCAF
• Chromosome Location: Chr.X: 153947556 - 153971833 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HCFC1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_005334.2	NP_005325.2	21 - 22	5910		110
	XM_006724815.2	XP_006724878.1	21 - 22	6510		110
	XM_006724816.2	XP_006724879.1	21 - 22	6507		110
	XM_017029471.1	XP_016884960.1	20 - 21	6309		110
	XM_017029472.1	XP_016884961.1	16 - 17	4695		110
GenBank mRNA	L20010.1	-	21 - 22	5726		110

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00011181.hg.1
This assay targets the same location as HTA transcript cluster(s) TC0X001522.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene HCFC1

Gene Ontology Categories:

Process(es)

negative regulation of transcription by RNA polymerase II
regulation of transcription, DNA-templated
transcription by RNA polymerase II
mitochondrion organization
cell cycle
positive regulation of gene expression
release from viral latency
regulation of protein-containing complex assembly
histone H4-K5 acetylation
histone H4-K8 acetylation
histone H4-K16 acetylation
positive regulation of cell cycle
positive regulation of transcription by RNA polymerase II
protein stabilization
cellular response to organic cyclic compound
cell-cell adhesion

Function(s)

chromatin binding
DNA-binding transcription factor activity
transcription coactivator activity
protein binding
identical protein binding
histone acetyltransferase activity (H4-K5 specific)
histone acetyltransferase activity (H4-K8 specific)
histone acetyltransferase activity (H4-K16 specific)
cadherin binding involved in cell-cell adhesion

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR0X020200.hg.1	ENST00000310441.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X020200.hg.1	ENST00000354233.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X020200.hg.1	ENST00000369984.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X020200.hg.1	NM_005334.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X020200.hg.1	TC0X001522.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0X00176177.hg.1	ENST00000310441.11	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00176177.hg.1	ENST00000369984.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00176177.hg.1	ENST00000444191.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00176177.hg.1	NM_005334.2	Refseq
Affymetrix Human Clariom D Assay	PSR0X00176177.hg.1	TC0X00011181.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00176177.hg.1	NM_005334.2	Refseq
Affymetrix Human Clariom D Assay	PSR0X00176177.hg.1	ENST00000310441.11	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00176177.hg.1	ENST00000369984.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00176177.hg.1	ENST00000444191.5	Ensembl