Hs01068014_m1

• Gene Symbol: CHD9
• Gene Name: chromodomain helicase DNA binding protein 9
• Gene Aliases: AD013, CHD-9, CReMM, KISH2, PRIC320
• Chromosome Location: Chr.16: 53054991 - 53327502 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CHD9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_017023724.1	XP_016879213.1	3 - 4	1724		92
	XM_017023725.1	XP_016879214.1	3 - 4	1724		92
	XM_017023726.1	XP_016879215.1	1 - 2	931		92
GenBank mRNA	AK299045.1	-	1 - 2	358		92

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AF150735.1	-	3 - 4			Chr. 16 - 53207974 - 53226385 [-] on Build GRCh38	92
GenBankmRNA	CN348885.1	-	1 - 2	349		Chr. 16 - 53207998 - 53222678 [+] on Build GRCh38	92
GenBankmRNA	DC363484.1	-	1 - 2	362		Chr. 16 - 53207986 - 53209706 [+] on Build GRCh38	92
GenBankmRNA	BE882430.1	-		308		Chr. - - [-] on Build	92
GenBankmRNA	DA287640.1	-	1 - 2	315		Chr. 16 - 53208032 - 53222711 [+] on Build GRCh38	92
GenBankmRNA	BU193734.1	-	1 - 2	260		Chr. 16 - 53208087 - 53226481 [+] on Build GRCh38	92
GenBankmRNA	DC369270.1	-	1 - 2	358		Chr. 16 - 53207989 - 53209718 [+] on Build GRCh38	92

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	p53-regulated lncRNA 1	LOC105371267	PR-lncRNA-1	-155.1kb	Anti-sense	Chr. 16 - 53035690 - 53052873 on NCBI Build GRCh38
Downstream	u3 small nucleolar ribonucleoprotein protein MPP10-like	LOC643802		159.5kb	Anti-sense	Chr. 16 - 53365391 - 53371212 on NCBI Build GRCh38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect transcript(s) from off target gene(s). Please contact Tech Support if you need more information.
This assay is in the 5'UTR region of the AK299045.1,XM_017023726.1 transcripts.

• Set Membership: Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
covalent chromatin modification
cellular lipid metabolic process

Function(s)

DNA binding
helicase activity
ATP binding