Hs01068048_m1

• Gene Symbol: CHD9
• Gene Name: chromodomain helicase DNA binding protein 9
• Gene Aliases: AD013, CHD-9, CReMM, KISH2, PRIC320
• Chromosome Location: Chr.16: 53054991 - 53327502 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CHD9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001308319.1	NP_001295248.1	6 - 7	2336		151
	NM_025134.4	NP_079410.4	7 - 8	2381		151
	XM_005256168.3	XP_005256225.1	7 - 8	2423		151
	XM_005256169.2	XP_005256226.1	7 - 8	2445		151
	XM_005256172.3	XP_005256229.1	7 - 8	2362		151
	XM_005256176.3	XP_005256233.1	6 - 7	1030		151
	XM_006721281.2	XP_006721344.1	7 - 8	2362		151
	XM_006721283.3	XP_006721346.1	7 - 8	2583		151
	XM_011523347.2	XP_011521649.1	8 - 9	2495		151
	XM_017023718.1	XP_016879207.1	8 - 9	2618		151
	XM_017023719.1	XP_016879208.1	9 - 10	2569		151
	XM_017023720.1	XP_016879209.1	8 - 9	2463		151
	XM_017023721.1	XP_016879210.1	8 - 9	2619		151
	XM_017023722.1	XP_016879211.1	8 - 9	2619		151
	XM_017023723.1	XP_016879212.1	8 - 9	2619		151
	XM_017023724.1	XP_016879213.1	8 - 9	2445		151
	XM_017023725.1	XP_016879214.1	8 - 9	2445		151
	XM_017023726.1	XP_016879215.1	6 - 7	1652		151
	XM_017023727.1	XP_016879216.1	6 - 7	1030		151
	XM_017023728.1	XP_016879217.1	8 - 9	2479		151
GenBank mRNA	AB002306.3	-	6 - 7	1804		151
	AK299045.1	-	6 - 7	1079		151
	AY243500.1	-	6 - 7	2259		151
	BC140815.1	-	6 - 7	2213	9021683	151
	BC144622.1	-	6 - 7	2213	9053153	151
	BX390832.2	-		225		151
	DQ333316.1	-	7 - 8	2475		151

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600007874.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000445.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CHD9

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
covalent chromatin modification
cellular lipid metabolic process

Function(s)

DNA binding
helicase activity
ATP binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR16006176.hg.1	ENST00000219084.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16006176.hg.1	ENST00000398510.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16006176.hg.1	ENST00000447540.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16006176.hg.1	NM_025134.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16006176.hg.1	TC16000445.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000398510.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000447540.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000564255.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000564845.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000565803.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000566029.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000615216.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	NM_001308319.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	NM_025134.5	Refseq
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000398510.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000447540.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000564255.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000564845.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000565803.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000566029.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	ENST00000615216.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	NM_001308319.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	NM_025134.5	Refseq
Affymetrix Human Clariom D Assay	PSR1600157390.hg.1	TC1600007874.hg.1	Clariom D TC