Hs01072360_g1

• Gene Symbol: CLCN6
• Gene Name: chloride voltage-gated channel 6
• Gene Aliases: CLC-6
• Chromosome Location: Chr.1: 11806096 - 11843144 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CLCN6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001256959.1	NP_001243888.1	11 - 12	1219		64
	NM_001286.3	NP_001277.1	12 - 13	1285		64
	NR_046428.1		12 - 13	1269		64
GenBank mRNA	AK289999.1	-	12 - 13	1190		64
	AK294764.1	-	11 - 12	1074		64
	BC117420.1	-	12 - 13	1142	40125971	64
	BC117424.1	-	12 - 13	1142	40125975	64
	D28475.2	-	12 - 13	1170		64
	X83378.1	-	12 - 13	1144		64
	X99473.1	-	12 - 13	1118		64

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100018166.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000149.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Ion Channel, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CLCN6

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Process(es)

chloride transport
cell volume homeostasis
signal transduction
response to mechanical stimulus
ion transmembrane transport
chloride transmembrane transport
regulation of anion transmembrane transport

Function(s)

voltage-gated chloride channel activity
ATP binding
antiporter activity
chloride ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01002403.hg.1	TC01000149.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01002403.hg.1	ENST00000312413.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01002403.hg.1	ENST00000346436.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01002403.hg.1	ENST00000376487.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01002403.hg.1	ENST00000376492.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01002403.hg.1	ENST00000376496.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01002403.hg.1	NM_001286.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	ENST00000312413.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	ENST00000346436.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	ENST00000376492.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	ENST00000376496.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	NM_001256959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	NM_001286.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	NR_046428.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	ENST00000312413.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	ENST00000346436.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	ENST00000376492.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	ENST00000376496.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	NM_001256959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	NM_001286.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	NR_046428.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100236943.hg.1	TC0100018166.hg.1	Clariom D TC