Hs01073317_m1

• Gene Symbol: CACNA1D
• Gene Name: calcium voltage-gated channel subunit alpha1 D
• Gene Aliases: CACH3, CACN4, CACNL1A2, CCHL1A2, Cav1.3, PASNA, SANDD
• Chromosome Location: Chr.3: 53495049 - 53813151 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CACNA1D
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000720.3	NP_000711.1	26 - 27	3344		74
	NM_001128839.2	NP_001122311.1	25 - 26	3284		74
	NM_001128840.2	NP_001122312.1	25 - 26	3284		74
	XM_005265448.3	XP_005265505.1	25 - 26	3166		74
	XM_011534094.2	XP_011532396.1	26 - 27	3352		74
	XM_011534096.2	XP_011532398.1	25 - 26	3292		74
	XM_011534097.2	XP_011532399.1	24 - 25	3819		74
	XM_011534099.2	XP_011532401.1	22 - 23	2802		74
	XM_011534100.2	XP_011532402.1	25 - 26	3292		74
	XM_017007137.1	XP_016862626.1	26 - 27	3352		74
	XM_017007138.1	XP_016862627.1	26 - 27	3349		74
	XM_017007139.1	XP_016862628.1	26 - 27	3352		74
	XM_017007140.1	XP_016862629.1	25 - 26	3292		74
	XM_017007141.1	XP_016862630.1	25 - 26	3292		74
	XM_017007142.1	XP_016862631.1	26 - 27	3352		74
	XM_017007143.1	XP_016862632.1	26 - 27	3352		74
	XM_017007144.1	XP_016862633.1	26 - 27	3352		74
	XM_017007145.1	XP_016862634.1	26 - 27	3352		74
GenBank mRNA	AB209171.1	-	20 - 21	2245		74
	EU363339.1	-	25 - 26	3166		74
	M76558.1	-	25 - 26	3676		74
	M83566.1	-	26 - 27	3344		74

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300007517.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000351.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Ion Channel, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CACNA1D

Panther Classification:

Molecular Function -

voltage-gated ion channel

Gene Ontology Categories:

Process(es)

calcium ion transport
adenylate cyclase-modulating G-protein coupled receptor signaling pathway
sensory perception of sound
regulation of insulin secretion
positive regulation of calcium ion transport
regulation of atrial cardiac muscle cell membrane repolarization
cardiac conduction
calcium ion import
calcium ion transmembrane transport
membrane depolarization during cardiac muscle cell action potential
membrane depolarization during SA node cell action potential
regulation of heart rate by cardiac conduction
regulation of potassium ion transmembrane transporter activity
regulation of potassium ion transmembrane transport

Function(s)

voltage-gated calcium channel activity
high voltage-gated calcium channel activity
ankyrin binding
metal ion binding
alpha-actinin binding
voltage-gated calcium channel activity involved in cardiac muscle cell action potential
voltage-gated calcium channel activity involved SA node cell action potential

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03007717.hg.1	TC03000351.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03007717.hg.1	ENST00000288139.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03007717.hg.1	ENST00000350061.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03007717.hg.1	ENST00000422281.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03007717.hg.1	NM_000720.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03007717.hg.1	NM_001128839.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03007717.hg.1	NM_001128840.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03007718.hg.1	TC03000351.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03007718.hg.1	ENST00000288139.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03007718.hg.1	ENST00000350061.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03007718.hg.1	ENST00000422281.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03007718.hg.1	NM_000720.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03007718.hg.1	NM_001128839.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03007718.hg.1	NM_001128840.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	ENST00000288139.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	ENST00000350061.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	ENST00000422281.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	ENST00000481478.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	NM_000720.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	NM_001128839.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	NM_001128840.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	ENST00000288139.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	ENST00000350061.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	ENST00000422281.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	ENST00000481478.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	NM_000720.3	Refseq
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	NM_001128839.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	NM_001128840.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300154376.hg.1	TC0300007517.hg.1	Clariom D TC