Name: [Hs01073598_s1] [NCBP2-AS2]
Creator: Thermo Fisher Scientific
Keywords: [NCBP2-AS2] Assay, [NCBP2 antisense RNA 2 (head to head)] Assay

Assay Details

Gene Symbol: NCBP2-AS2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_024388.1		1	1241		73
GenBank mRNA	AK123020.1	-	1	1192		73

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BX104969.1	-	1		Chr. 3 - 196943494 - 196944027 [-] on Build GRCh38	74
GenBankmRNA	DB296524.1	-	1		Chr. 3 - 196943459 - 196944013 [-] on Build GRCh38	73
GenBankmRNA	BU681924.1	-	1		Chr. 3 - 196943393 - 196944031 [-] on Build GRCh38	73
GenBankmRNA	BF218144.1	-	1		Chr. 3 - 196943520 - 196944038 [+] on Build GRCh38	73
GenBankmRNA	BQ680922.1	-	1	300	Chr. 3 - 196943564 - 196944039 [+] on Build GRCh38	73

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	nuclear cap binding protein subunit 2	NCBP2	CBC2, CBP20, NIP1, PIG55	-866.0	Sense	Chr. 3 - 196935402 - 196942594 on NCBI Build GRCh38
Downstream	phosphatidylinositol glycan anchor biosynthesis class Z	PIGZ	GPI-MT-IV, PIG-Z, SMP3	2.3kb	Sense	Chr. 3 - 196946343 - 196969411 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300010040.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Detect Genomic DNA

Homo sapiens

1700

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Human CGH Microarray 4x180K	142513	-	-
Agilent SurePrint G3 Human CGH Microarray 8x60K	57040	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	537513	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	129268	AB029032.2	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	129268	AK025057.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	129268	AK095216.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	129268	AK225886.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	129268	AK309063.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	129268	AL137384.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	129268	CR936613.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	129268	DQ335469.1	genbank_mrna_human
Agilent SurePrint G3 Human CNV Microarray 2x400K	129268	NM_015312.2	refseq_mrna_human_NM
Agilent Whole Human Genome Microarray 4x44K v2	A_23_P6708	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_23_P6708	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_24_P80406	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	11638	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	19361	-	-
Agilent Human Genome CGH Microarray 44B	A_14_P124917	-	-
Agilent Human Genome CGH Microarray 44A	A_14_P124917	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	12001	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_23_P6708	-	-
SurePrint G3 Human GE Microarray G4851A	A_23_P6708	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880809	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880814	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880808	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880813	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880811	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P23023272	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P23023280	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880815	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880811	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880814	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880813	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880808	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P23023280	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880815	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02880809	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P23023272	-	-
Whole Human Genome Oligo Microarray G4112A	A_24_P80406	-	-
Whole Human Genome Oligo Microarray G4112A	A_23_P6708	-	-
Agilent Human Genome CGH Microarray 105A (G4412A)	A_14_P124917	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_14_P124917	-	-
Agilent Human Genome CGH Microarray 4x44K	A_14_P124917	-	-
Agilent Whole Human Genome Microarray 4x44K G4112F	A_23_P6708	-	-
Agilent Whole Human Genome Microarray 4x44K G4112F	A_24_P80406	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	94970	-	-
Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015	99730	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_14_P124917	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P02880816	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P02880808	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P02880809	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P02880814	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P02880811	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_14_P124917	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	8084985	-	-
Affymetrix Human Gene 1.0 ST Array	8084984	-	-
Affymetrix Human Gene 1.0 ST Array	8084983	-	-
Affymetrix Human Gene 1.1 ST Array	8084982	-	-
Affymetrix HT HG-U133+ PM Array Plate	225657_PM_at	-	-
Affymetrix Human Clariom D Assay	PSR0300173134.hg.1	NR_024388.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300173134.hg.1	NR_024388.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300173134.hg.1	TC0300010040.hg.1	Clariom D TC
Human Genome U133 Plus 2.0 Array	225657_PM_at	-	-
Human Genome U133 Plus 2.0 Array	225657_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	225657_at10	-	-
Human Genome U95 Set	59411_at	-	-
Human Genome U95 Set	59411_PM_at	-	-
Human Genome U133 Set	225657_at	-	-
Human Genome U133 Set	225657_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3248614	NR_024388.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3248614	AK123020.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3248614	NR_024388.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3248614	AK123020.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3248614	NR_024388.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3248614	AK123020.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3248614	NR_024388.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3248614	AK123020.1	human_transcriptome

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Catalog #	4426961
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Genomic Map