Hs01076177_m1

• Gene Symbol: CDHR2
• Gene Name: cadherin related family member 2
• Gene Aliases: PCDH24, PCLKC
• Chromosome Location: Chr.5: 176542511 - 176595768 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CDHR2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001171976.1	NP_001165447.1	20 - 21	3082		112
	NM_017675.4	NP_060145.3	20 - 21	2896		112
GenBank mRNA	AB047004.1	-	19 - 20	2846		112
	AK000131.1	-	5 - 6	1035		112
	AK000390.1	-	15 - 16	2450		112
	AK225217.1	-	5 - 6	1035		112
	AK315055.1	-	20 - 21	3082		112
	BC130282.1	-	19 - 20	2855	40146313	112

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500009594.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05001002.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CDHR2

Gene Ontology Categories:

Process(es)

homophilic cell adhesion via plasma membrane adhesion molecules
epithelial cell differentiation
regulation of microvillus length
cell-cell adhesion mediated by cadherin
negative regulation of cell growth involved in contact inhibition
intermicrovillar adhesion

Function(s)

calcium ion binding
protein binding
cell adhesion molecule binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05014421.hg.1	ENST00000261944.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05014421.hg.1	ENST00000506348.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05014421.hg.1	ENST00000510636.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05014421.hg.1	NM_001171976.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05014421.hg.1	NM_017675.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05014421.hg.1	TC05001002.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	ENST00000261944.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	ENST00000506348.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	ENST00000508085.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	ENST00000510636.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	ENST00000513031.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	NM_001171976.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	NM_017675.4	Refseq
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	TC0500009594.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	ENST00000506348.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	ENST00000261944.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	ENST00000508085.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	ENST00000510636.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	ENST00000513031.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	NM_001171976.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500167150.hg.1	NM_017675.4	Refseq