Hs01078891_m1

• Gene Symbol: GTF2IRD1
• Gene Name: GTF2I repeat domain containing 1
• Gene Aliases: BEN, CREAM1, GTF3, MUSTRD1, RBAP2, WBS, WBSCR11, WBSCR12, hMusTRD1alpha1
• Chromosome Location: Chr.7: 74453790 - 74603070 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: GTF2IRD1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001199207.1	NP_001186136.1	10 - 11	1790		90
	NM_005685.3	NP_005676.3	10 - 11	1694		90
	NM_016328.2	NP_057412.1	10 - 11	1694		90
	XM_006716182.3	XP_006716245.1	10 - 11	1490		90
	XM_006716183.3	XP_006716246.1	10 - 11	1335		90
	XM_011516713.1	XP_011515015.1	10 - 11	1490		90
	XM_017012802.1	XP_016868291.1	10 - 11	1490		90
	XM_017012803.1	XP_016868292.1	10 - 11	1490		90
	XM_017012804.1	XP_016868293.1	10 - 11	1419		90
	XM_017012805.1	XP_016868294.1	10 - 11	1490		90
GenBank mRNA	AB209389.1	-	10 - 11	2992		90
	AF089107.1	-	9 - 10	1308		90
	AF104923.1	-	10 - 11	1340		90
	AF118270.2	-	10 - 11	1349		90
	AF151354.1	-	10 - 11	1694		90
	AF156489.1	-	10 - 11	1397		90
	AK308242.1	-	4 - 5	362		90
	AY648295.1	-	10 - 11	1610		90
	BC018136.1	-	10 - 11	1459	3913745	90

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700008004.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07000455.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene GTF2IRD1

Panther Classification:

Molecular Function -

general transcription factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
multicellular organism development
transition between slow and fast fiber

Function(s)

RNA polymerase II transcription factor activity, sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07006213.hg.1	TC07000455.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07006213.hg.1	ENST00000265755.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07006213.hg.1	ENST00000424337.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07006213.hg.1	ENST00000455841.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07006213.hg.1	ENST00000476977.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07006213.hg.1	ENST00000489094.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07006213.hg.1	NM_001199207.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07006213.hg.1	NM_005685.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07006213.hg.1	NM_016328.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	ENST00000265755.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	ENST00000424337.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	ENST00000455841.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	ENST00000476977.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	ENST00000489094.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	NM_001199207.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	NM_005685.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	NM_016328.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	ENST00000265755.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	ENST00000424337.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	ENST00000455841.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	ENST00000476977.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	ENST00000489094.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	NM_001199207.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	NM_005685.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	NM_016328.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700155357.hg.1	TC0700008004.hg.1	Clariom D TC