Hs01079726_s1

• Gene Symbol: SDK1
• Gene Name: sidekick cell adhesion molecule 1
• Gene Aliases: -
• Chromosome Location: Chr.7: 3301448 - 4269000 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SDK1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_152744.3	NP_689957.3	45	10009		135
	XM_017011837.1	XP_016867326.1	39	8850		135
GenBank mRNA	AF131799.1	-	1	931		135
	AK055988.1	-	1	1910		135
	AK074077.1	-	12	4949		135

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700006583.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07000040.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Homo sapiens, 1700, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SDK1

Gene Ontology Categories:

Process(es)

homophilic cell adhesion via plasma membrane adhesion molecules
synapse assembly
retina layer formation
behavioral response to cocaine
regulation of dendritic spine development

Function(s)

identical protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07000646.hg.1	TC07000040.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07000646.hg.1	ENST00000404826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07000646.hg.1	NM_001079653.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07000646.hg.1	NM_152744.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	ENST00000404826.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	ENST00000476701.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	ENST00000615806.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	NM_001079653.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	NM_152744.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	ENST00000404826.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	ENST00000476701.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	ENST00000615806.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	NM_001079653.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	NM_152744.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700145271.hg.1	TC0700006583.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	175369	-	-
ABI Human Genome Survey Microarray Version 2.0	231806	-	-
ABI Human Genome Survey Microarray Version 2.0	234955	-	-