Hs01082225_m1 Best Coverage

• Gene Symbol: XRN2
• Gene Name: 5'-3' exoribonuclease 2
• Gene Aliases: -
• Chromosome Location: Chr.20: 21303284 - 21389825 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: XRN2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001317960.1	NP_001304889.1	3 - 4	590		170
	NM_012255.4	NP_036387.2	3 - 4	430		170
	XM_017027722.1	XP_016883211.1	3 - 4	585		170
	XM_017027723.1	XP_016883212.1	3 - 4	359		170
	XM_017027724.1	XP_016883213.1	3 - 4	585		170
GenBank mRNA	AF152169.1	-	3 - 4			170
	AK001573.1	-	3 - 4	400		170
	AK302846.1	-	3 - 4	294		170
	AK314602.1	-	3 - 4	369		170
	AL136841.1	-	3 - 4	356		170
	CF994999.1	-	3 - 4	437		170

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000006899.hg.1
This assay targets the same location as HTA transcript cluster(s) TC20000140.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_017027723.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Recommended Assay, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene XRN2

Panther Classification:

Molecular Function -

exoribonuclease

Gene Ontology Categories:

Process(es)

DNA catabolic process, exonucleolytic
DNA-templated transcription, termination
regulation of transcription, DNA-templated
rRNA processing
RNA processing
mRNA processing
RNA catabolic process
spermatogenesis
cell growth
RNA metabolic process
RNA phosphodiester bond hydrolysis, exonucleolytic

Function(s)

3'-5'-exoribonuclease activity
transcription termination site sequence-specific DNA binding
nuclease activity
5'-3' exoribonuclease activity
protein binding
5'-3' exonuclease activity
poly(A) RNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20001865.hg.1	ENST00000377191.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20001865.hg.1	ENST00000430571.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20001865.hg.1	ENST00000539513.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR20001865.hg.1	NM_012255.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR20001865.hg.1	TC20000140.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	TC2000006899.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	PSR2000147237.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000147237.hg.1	NM_012255.4	Refseq
Affymetrix Human Clariom D Assay	PSR2000147237.hg.1	TC2000006899.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000147237.hg.1	ENST00000377191.4	Ensembl
Affymetrix Human Clariom D Assay	PSR2000147237.hg.1	NM_012255.4	Refseq