Hs01085501_m1

• Gene Symbol: SEMA3A
• Gene Name: semaphorin 3A
• Gene Aliases: COLL1, HH16, Hsema-I, Hsema-III, SEMA1, SEMAD, SEMAIII, SEMAL, SemD, coll-1
• Chromosome Location: Chr.7: 83956846 - 84492724 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SEMA3A
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006080.2	NP_006071.1	6 - 7	974		65
	XM_005250110.3	XP_005250167.1	9 - 10	1169		65
	XM_005250111.4	XP_005250168.1	8 - 9	1009		65
	XM_006715839.3	XP_006715902.1	7 - 8	912		65
	XM_011515734.2	XP_011514036.1	9 - 10	994		65
	XM_017011673.1	XP_016867162.1	7 - 8	829		65
GenBank mRNA	AK289954.1	-	6 - 7	1067		65
	BC111416.1	-	6 - 7	673	40034963	65
	L26081.1	-	6 - 7	674		65

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700013578.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07001568.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SEMA3A

Panther Classification:

Molecular Function -

membrane-bound signaling molecule, intercellular signal molecule

Gene Ontology Categories:

Process(es)

neural crest cell migration
neuron migration
regulation of heart rate
apoptotic process
axon guidance
axonal fasciculation
negative regulation of epithelial cell migration
facial nerve structural organization
trigeminal nerve structural organization
nerve development
olfactory bulb development
branchiomotor neuron axon guidance
gonadotrophin-releasing hormone neuronal migration to the hypothalamus
ventral trunk neural crest cell migration
sympathetic nervous system development
dendrite morphogenesis
regulation of axon extension involved in axon guidance
negative regulation of axon extension involved in axon guidance
axon extension involved in axon guidance
sensory system development
negative chemotaxis
axonogenesis involved in innervation
dichotomous subdivision of terminal units involved in salivary gland branching
sympathetic ganglion development
trigeminal ganglion development
semaphorin-plexin signaling pathway
sympathetic neuron projection extension
sympathetic neuron projection guidance
neural crest cell migration involved in autonomic nervous system development
semaphorin-plexin signaling pathway involved in neuron projection guidance
semaphorin-plexin signaling pathway involved in axon guidance
neural crest cell migration involved in sympathetic nervous system development
facioacoustic ganglion development
positive regulation of male gonad development
positive regulation of neuron migration

Function(s)

semaphorin receptor binding
neuropilin binding
chemorepellent activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07023680.hg.1	TC07001568.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07023680.hg.1	ENST00000265362.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07023680.hg.1	ENST00000436949.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07023680.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000420047.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000420047.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000420047.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000420047.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000420047.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000420047.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000420047.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000420047.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000420047.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000420047.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	TC0700013578.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700201040.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700201040.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700201040.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700201040.hg.1	ENST00000265362.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700201040.hg.1	ENST00000436949.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700201040.hg.1	NM_006080.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700201040.hg.1	TC0700013578.hg.1	Clariom D TC