Hs01086113_m1 Best Coverage

• Gene Symbol: TFPT
• Gene Name: TCF3 fusion partner
• Gene Aliases: FB1, INO80F, amida
• Chromosome Location: Chr.19: 54107013 - 54115675 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TFPT
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001321792.1	NP_001308721.1	3 - 4	366		64
	NM_013342.3	NP_037474.1	3 - 4	760		64
	XM_005278261.1	XP_005278318.1	2 - 3	236		64
GenBank mRNA	AF052052.1	-	4 - 5	633		64
	BC004281.1	-	3 - 4	392	3616596	64
	BC007776.2	-	3 - 4	378	4301790	64

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1900011392.hg.1
This assay targets the same location as HTA transcript cluster(s) TC19001832.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_005278261.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TFPT

Gene Ontology Categories:

Process(es)

DNA repair
DNA recombination
transcription, DNA-templated
regulation of transcription, DNA-templated
male gonad development
positive regulation of apoptotic process
apoptotic signaling pathway

Function(s)

DNA binding
protein binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR19024755.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19024755.hg.1	ENST00000391758.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19024755.hg.1	ENST00000391759.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19024755.hg.1	NM_013342.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19024755.hg.1	TC19001832.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19024756.hg.1	ENST00000391758.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19024756.hg.1	ENST00000391759.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19024756.hg.1	NM_013342.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19024756.hg.1	TC19001832.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19024757.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19024757.hg.1	ENST00000391758.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19024757.hg.1	ENST00000391759.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19024757.hg.1	NM_013342.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19024757.hg.1	TC19001832.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	PSR1900196074.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196074.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196074.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196074.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	PSR1900196074.hg.1	TC1900011392.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900196074.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196074.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196074.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196074.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	TC1900011392.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	TC1900011392.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196073.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	NM_013342.3	Refseq
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	TC1900011392.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	ENST00000391757.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	ENST00000391758.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	ENST00000391759.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	ENST00000420715.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1900196075.hg.1	NM_013342.3	Refseq