Hs01086471_m1

• Gene Symbol: CHD5
• Gene Name: chromodomain helicase DNA binding protein 5
• Gene Aliases: CHD-5
• Chromosome Location: Chr.1: 6101787 - 6180134 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CHD5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015557.2	NP_056372.1	34 - 35	5115		146
GenBank mRNA	AB007913.1	-	16 - 17	2076		146
	AF425231.1	-	34 - 35	5104		146
	AK126012.1	-	14 - 15	1907		146
	AK127046.1	-	26 - 27	3722		146
	AL117491.1	-	24 - 25	3308		146

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100012668.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01002144.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CHD5

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
negative regulation of cell proliferation
cerebral cortex neuron differentiation
spermatogenesis, exchange of chromosomal proteins
histone H4 acetylation
regulation of transcription involved in cell fate commitment
histone H3-K27 trimethylation
positive regulation of signal transduction by p53 class mediator

Function(s)

DNA binding
ATP binding
ATP-dependent helicase activity
zinc ion binding
H3K27me3 modified histone binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01032991.hg.1	TC01002144.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01032991.hg.1	ENST00000262450.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01032991.hg.1	ENST00000377999.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01032991.hg.1	ENST00000378021.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01032991.hg.1	ENST00000462991.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01032991.hg.1	ENST00000536802.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01032991.hg.1	ENST00000538279.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01032991.hg.1	NM_015557.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	ENST00000262450.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	ENST00000377999.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	ENST00000462991.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	ENST00000496404.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	NM_015557.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	ENST00000262450.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	ENST00000377999.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	ENST00000462991.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	ENST00000496404.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	NM_015557.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100193741.hg.1	TC0100012668.hg.1	Clariom D TC