Hs01089073_m1

• Gene Symbol: CHST9
• Gene Name: carbohydrate sulfotransferase 9
• Gene Aliases: GALNAC4ST-2, GalNAc4ST2
• Chromosome Location: Chr.18: 26908754 - 27185364 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CHST9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001256316.1	NP_001243245.1	2 - 3	416		100
	NM_031422.5	NP_113610.2	2 - 3	416		100
	XM_006722555.3	XP_006722618.1	2 - 3	373		100
	XM_017026033.1	XP_016881522.1	1 - 2	315		100
	XM_017026034.1	XP_016881523.1	2 - 3	442		100
GenBank mRNA	AF239821.1	-	2 - 3	293		100
	AF332472.1	-	1 - 2	207		100
	AJ707539.1	-	2 - 3	403		100
	AK093349.1	-	1 - 2	315		100
	AY358488.1	-	2 - 3	395		100
	BC025764.1	-	2 - 3	360	5205829	100
	BM919514.1	-	2 - 3	395		100
	DB444451.1	-	1 - 2	346		100
	KU178792.1	-	1 - 2	102		100
	KU178793.1	-	1 - 2	102		100

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1800008349.hg.1
This assay targets the same location as HTA transcript cluster(s) TC18000430.hg.1

Additional Information:

This assay is in the 5'UTR region of the XM_017026034.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CHST9

Panther Classification:

Molecular Function -

transferase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

sulfur compound metabolic process
carbohydrate biosynthetic process
proteoglycan biosynthetic process
glycosaminoglycan metabolic process
chondroitin sulfate biosynthetic process
hormone biosynthetic process

Function(s)

N-acetylgalactosamine 4-O-sulfotransferase activity
chondroitin 4-sulfotransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR18004369.hg.1	ENST00000284224.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18004369.hg.1	NM_001256316.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004369.hg.1	NM_031422.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18004369.hg.1	TC18000430.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000284224.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000284224.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000284224.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000284224.9	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000284224.9	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000284224.9	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000284224.9	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000284224.9	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_001256316.1	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	TC1800008349.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	ENST00000284224.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	NM_001256316.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	NM_031422.5	Refseq
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	TC1800008349.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	ENST00000284224.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	ENST00000580774.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	ENST00000581714.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	ENST00000618847.4	Ensembl
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	NM_001256316.1	Refseq
Affymetrix Human Clariom D Assay	PSR1800156944.hg.1	NM_031422.5	Refseq