Hs01089083_m1

• Gene Symbol: CPSF3
• Gene Name: cleavage and polyadenylation specific factor 3
• Gene Aliases: CPSF-73, CPSF73
• Chromosome Location: Chr.2: 9423537 - 9473110 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CPSF3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001321833.1	NP_001308762.1	16 - 17	2321		132
	NM_001321834.1	NP_001308763.1	16 - 17	3229		132
	NM_001321835.1	NP_001308764.1	16 - 17	1964		132
	NM_001321836.1	NP_001308765.1	17 - 18	2411		132
	NM_016207.3	NP_057291.1	16 - 17	2092		132
GenBank mRNA	AF171877.1	-	16 - 17	1870		132
	AK025440.1	-	14 - 15	1751		132
	AK223487.1	-	16 - 17	1890		132
	AK298918.1	-	14 - 15	1685		132
	BC011654.2	-	16 - 17	1965	4304135	132
	BC014106.1	-	16 - 17	2882		132
	BC020211.1	-	16 - 17	1890	4890593	132
	EF036508.1	-	3 - 4	252		132

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200006647.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CPSF3

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
termination of RNA polymerase II transcription
mRNA polyadenylation
mRNA cleavage
mRNA 3'-end processing by stem-loop binding and cleavage
mRNA export from nucleus
mRNA 3'-end processing
RNA phosphodiester bond hydrolysis, endonucleolytic

Function(s)

RNA binding
endoribonuclease activity
protein binding
5'-3' exonuclease activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR0200145483.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145483.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145483.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145483.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200145483.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145483.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145483.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145483.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200145483.hg.1	TC0200006647.hg.1	Clariom D TC