Hs01089086_m1

• Gene Symbol: CPSF3
• Gene Name: cleavage and polyadenylation specific factor 3
• Gene Aliases: CPSF-73, CPSF73
• Chromosome Location: Chr.2: 9423537 - 9473110 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CPSF3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001321833.1	NP_001308762.1	2 - 3	580		89
	NM_001321834.1	NP_001308763.1	2 - 3	1488		89
	NM_001321835.1	NP_001308764.1	2 - 3	351		89
	NM_001321836.1	NP_001308765.1	3 - 4	670		89
	NM_016207.3	NP_057291.1	2 - 3	351		89
GenBank mRNA	AF171877.1	-	2 - 3	129		89
	AK223487.1	-	2 - 3	149		89
	AK298918.1	-	2 - 3	227		89
	BC011654.2	-	2 - 3	224	4304135	89
	BC014106.1	-	2 - 3	1141		89
	BC020211.1	-	2 - 3	149	4890593	89
	BC030988.1	-	2 - 3	237		89
	BG773037.1	-	3 - 4	223		89
	DA455023.1	-	2 - 3	466		89
	DA478774.1	-	2 - 3	227		89
	DC420903.1	-	2 - 3	351		89

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200006647.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02000047.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK298918.1,NM_001321833.1,NM_001321834.1,NM_001321835.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CPSF3

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
termination of RNA polymerase II transcription
mRNA polyadenylation
mRNA cleavage
mRNA 3'-end processing by stem-loop binding and cleavage
mRNA export from nucleus
mRNA 3'-end processing
RNA phosphodiester bond hydrolysis, endonucleolytic

Function(s)

RNA binding
endoribonuclease activity
protein binding
5'-3' exonuclease activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489629.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489629.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489629.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	ENST00000489629.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02000547.hg.1	TC02000047.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02000547.hg.1	ENST00000238112.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02000547.hg.1	ENST00000427001.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02000547.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02000547.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489403.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489629.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489629.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489629.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	ENST00000489629.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	TC0200006647.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200145466.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145466.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145466.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145466.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200145466.hg.1	ENST00000238112.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145466.hg.1	ENST00000460593.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145466.hg.1	ENST00000475482.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200145466.hg.1	NM_016207.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200145466.hg.1	TC0200006647.hg.1	Clariom D TC