Name: [Hs01089157_s1] [LOC79160]
Creator: Thermo Fisher Scientific
Keywords: [LOC79160] Assay, [uncharacterized LOC79160] Assay

Assay Details

Gene Symbol: LOC79160
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_125359.1		1	929		85
GenBank mRNA	BC002831.2	-	1	929	3636069	85
GenBank mRNA	BU624279.1	-	1			85

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BU621514.1	-	1			Chr. 20 - 58635036 - 58635738 [-] on Build GRCh38	85
GenBankmRNA	BE301183.1	-	1			Chr. 20 - 58635402 - 58635738 [-] on Build GRCh38	85

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	APCDD1L antisense RNA 1 (head to head)	APCDD1L-AS1		-15.1kb	Anti-sense	Chr. 20 - 58515379 - 58619892 on NCBI Build GRCh38
Downstream	syntaxin 16	STX16	SYN16	15.5kb	Anti-sense	Chr. 20 - 58651253 - 58679526 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2000007905.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

1700

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240528	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890430	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240514	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240439	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240523	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240440	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240446	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890412	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240487	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240512	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890448	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240524	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240436	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240496	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240511	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240477	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240418	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240421	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240422	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240434	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240520	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17203915	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890483	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17203911	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240468	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240497	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240485	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890427	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890437	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240501	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240458	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890433	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240419	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240454	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240479	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240517	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240499	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240491	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240483	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890461	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240508	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17203920	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240510	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890402	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240447	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240445	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890421	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240428	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240480	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240504	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240478	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890452	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240426	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240442	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890440	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240417	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240503	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240522	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240527	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890400	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240424	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240449	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240516	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240431	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240455	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890428	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240490	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240450	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240493	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240452	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240473	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240457	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890451	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240443	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240482	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17203919	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240507	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240481	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890431	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240456	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240420	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17203914	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240475	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240471	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P17203908	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P11240425	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P31890463	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	152071	-	-
Agilent SurePrint G3 Human CGH Microarray 8x60K	20937	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_23_P102681	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	43253	-	-
Agilent Human Genome CGH Microarray 44B	A_14_P107706	-	-
Agilent Human Genome CGH Microarray 44A	A_14_P107706	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	3752	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_23_P102681	-	-
Agilent Human Genome CGH Microarray 105A (G4412A)	A_14_P107706	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_14_P107706	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	170245	-	-
Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015	99599	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_14_P107706	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_14_P107706	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.1 ST Array	8063634	-	-
Affymetrix HT HG-U133+ PM Array Plate	220698_PM_at	-	-
Affymetrix Human Clariom D Assay	PSR2000154840.hg.1	ENST00000598340.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2000154840.hg.1	NR_125359.1	Refseq
Affymetrix Human Clariom D Assay	PSR2000154840.hg.1	TC2000007905.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2000154840.hg.1	ENST00000598340.2	Ensembl
Affymetrix Human Clariom D Assay	PSR2000154840.hg.1	NR_125359.1	Refseq
Human Genome U133 Plus 2.0 Array	220698_at	-	-
Human Genome U133 Plus 2.0 Array	220698_PM_at	-	-
Human Genome U133A 2.0 Array	220698_at	-	-
Human Genome U133A 2.0 Array	220698_PM_at	-	-
AffymetrixPathwork Diagnostics Pathchip	pw529367	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	220698_at5	-	-
Human Genome U133 Set	220698_at	-	-
Human Genome U133 Set	220698_PM_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	143099	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1749414	BC002831.2	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1749414	BC002831.2	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1749414	BC002831.2	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1749414	BC002831.2	human_transcriptome

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Catalog #	4426961
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Genomic Map