Hs01090296_m1

• Gene Symbol: VTI1A
• Gene Name: vesicle transport through interaction with t-SNAREs 1A
• Gene Aliases: MMDS3, MVti1, VTI1RP2, Vti1-rp2
• Chromosome Location: Chr.10: 112446988 - 112947204 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: VTI1A
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001318203.1	NP_001305132.1	7 - 8	902		113
	NM_001318205.1	NP_001305134.1	6 - 7	881		113
	NM_145206.3	NP_660207.2	6 - 7	881		113
	XM_005269544.4	XP_005269601.1	6 - 7	835		113
	XM_005269545.4	XP_005269602.1	7 - 8	902		113
	XM_005269546.3	XP_005269603.1	7 - 8	902		113
	XM_005269547.4	XP_005269604.1	6 - 7	835		113
	XM_006717637.2	XP_006717700.1	7 - 8	902		113
	XM_011539328.2	XP_011537630.1	7 - 8	902		113
	XM_011539330.2	XP_011537632.1	7 - 8	902		113
	XM_011539331.2	XP_011537633.1	7 - 8	902		113
	XM_017015745.1	XP_016871234.1	7 - 8	902		113
	XM_017015746.1	XP_016871235.1	6 - 7	835		113
	XM_017015747.1	XP_016871236.1	7 - 8	902		113
	XM_017015748.1	XP_016871237.1	6 - 7	835		113
GenBank mRNA	AI610960.1	-	2 - 3	167		113
	AI693064.1	-	2 - 3			113
	AK303646.1	-	6 - 7	592		113
	BC017052.1	-	6 - 7	611	3885564	113
	BI010424.1	-	2 - 3			113

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000008927.hg.1
This assay targets the same location as HTA transcript cluster(s) TC10000814.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene VTI1A

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Process(es)

protein targeting to vacuole
ER to Golgi vesicle-mediated transport
intra-Golgi vesicle-mediated transport
Golgi to vacuole transport
autophagy
retrograde transport, endosome to Golgi
vesicle fusion with Golgi apparatus
voluntary musculoskeletal movement
Golgi ribbon formation

Function(s)

SNARE binding
SNAP receptor activity
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR10009813.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10009813.hg.1	ENST00000432306.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10009813.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10009813.hg.1	TC10000814.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000472892.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000472892.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000472892.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000472892.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000480057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000480057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000480057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000480057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000480057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000489142.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000489142.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000489142.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000489142.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000489142.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000489357.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000489357.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000489357.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000489357.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000489357.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000494728.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000494728.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000494728.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000494728.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000494728.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10009814.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10009814.hg.1	ENST00000432306.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10009814.hg.1	NM_145206.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10009814.hg.1	TC10000814.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1000161085.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000161085.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1000161085.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	PSR1000161085.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000161085.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1000161085.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	PSR1000161085.hg.1	TC1000008927.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000161086.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000161086.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1000161086.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	PSR1000161086.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1000161086.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1000161086.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	PSR1000161086.hg.1	TC1000008927.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000161087.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1000161087.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1000161087.hg.1	TC1000008927.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000393077.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000432306.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000472892.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000472892.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000472892.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000472892.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000480057.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000480057.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000480057.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000480057.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000480057.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000483122.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000489142.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000489142.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000489142.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000489142.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000489142.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000489357.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000489357.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000489357.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000489357.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000489357.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000494728.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000494728.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000494728.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000494728.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000494728.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	ENST00000496445.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq
Affymetrix Human Clariom D Assay	TC1000008927.hg.1	NM_145206.3	Refseq