Hs01096300_m1

• Gene Symbol: UBE3B
• Gene Name: ubiquitin protein ligase E3B
• Gene Aliases: BPIDS, KOS
• Chromosome Location: Chr.12: 109477410 - 109543628 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: UBE3B
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_130466.3	NP_569733.2	23 - 24	3181		71
	NM_183415.2	NP_904324.1	23 - 24	2836		71
	XM_005253987.2	XP_005254044.1	23 - 24	3061		71
	XM_006719681.3	XP_006719744.1	23 - 24	3394		71
	XM_006719682.2	XP_006719745.1	23 - 24	3394		71
	XM_011538959.2	XP_011537261.1	22 - 23	2943		71
	XM_011538961.1	XP_011537263.1	23 - 24	3394		71
	XM_017020195.1	XP_016875684.1	23 - 24	3604		71
GenBank mRNA	AF130072.1	-	21 - 22	2573		71
	AF251046.2	-	23 - 24	3151		71
	AK127227.1	-	8 - 9	1968		71
	AK307385.1	-	22 - 23	2715		71
	AL096740.1	-	24 - 25	3247		71
	BC020348.1	-	8 - 9	875		71
	BC032301.1	-	23 - 24	2814		71
	BC141880.1	-	23 - 24	3059	40124513	71
	BC144684.1	-	23 - 24	3157		71
	BC150637.1	-	23 - 24	2812	9057007	71
	BX537403.1	-	23 - 24	2826		71

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200008800.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12000848.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene UBE3B

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Function(s)

ubiquitin-protein transferase activity
ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12010976.hg.1	ENST00000342494.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12010976.hg.1	ENST00000434735.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12010976.hg.1	ENST00000538070.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12010976.hg.1	NM_130466.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12010976.hg.1	NM_183415.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12010976.hg.1	TC12000848.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	ENST00000342494.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	ENST00000434735.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	ENST00000449510.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	ENST00000538070.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	ENST00000539599.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	NM_130466.3	Refseq
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	NM_183415.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	ENST00000342494.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	ENST00000434735.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	ENST00000449510.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	ENST00000538070.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	ENST00000539599.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	NM_130466.3	Refseq
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	NM_183415.2	Refseq
Affymetrix Human Clariom D Assay	PSR1200165177.hg.1	TC1200008800.hg.1	Clariom D TC