Hs01096997_g1

• Gene Symbol: ABCA2
• Gene Name: ATP binding cassette subfamily A member 2
• Gene Aliases: ABC2
• Chromosome Location: Chr.9: 137007234 - 137028922 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ABCA2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001606.4	NP_001597.2	40 - 41	6325		76
	NM_212533.2	NP_997698.1	40 - 41	6317		76
	XM_006716996.3	XP_006717059.1	39 - 40	6259		76
GenBank mRNA	AB028985.2	-	26 - 27	4182		76
	AF178941.1	-	39 - 40	6227		76
	AF327657.1	-	39 - 40	6183		76
	AK295489.1	-	6 - 7	793		76
	BC008755.1	-	11 - 12	1472		76
	BC144588.1	-	38 - 39	6387		76

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900012025.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001749.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Transporter, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene ABCA2

Panther Classification:

Molecular Function -

ATP-binding cassette (ABC) transporter, primary active transporter, transporter

Gene Ontology Categories:

Process(es)

regulation of transcription from RNA polymerase II promoter
lipid metabolic process
transport
regulation of intracellular cholesterol transport
cholesterol efflux
phospholipid efflux
response to drug
cholesterol homeostasis
response to steroid hormone
transmembrane transport

Function(s)

nucleotide binding
ATP binding
ATPase activity
ATPase activity, coupled to transmembrane movement of substances

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09022526.hg.1	TC09001749.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09022526.hg.1	ENST00000265662.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022526.hg.1	ENST00000341511.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022526.hg.1	ENST00000355090.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022526.hg.1	ENST00000371605.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022526.hg.1	ENST00000398210.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09022526.hg.1	NM_001606.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09022526.hg.1	NM_212533.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000265662.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000341511.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000371605.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000437791.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000459850.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000479446.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000487109.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000614293.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	NM_001606.4	Refseq
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	NM_212533.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000265662.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000341511.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000371605.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000437791.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000459850.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000479446.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000487109.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	ENST00000614293.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	NM_001606.4	Refseq
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	NM_212533.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900182598.hg.1	TC0900012025.hg.1	Clariom D TC