Hs01099393_g1

• Gene Symbol: FEN1
• Gene Name: flap structure-specific endonuclease 1
• Gene Aliases: FEN-1, MF1, RAD2
• Chromosome Location: Chr.11: 61792637 - 61797244 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: FEN1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_004111.5	NP_004102.1	1 - 2	395		80
GenBank mRNA	AK312761.1	-	1 - 2	98		80
	BC000323.2	-	1 - 2	111	2821792	80
	BP244711.1	-	1 - 2	375		80
	CN290841.1	-	1 - 2	395		80
	X76771.1	-	1 - 2	349		80

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100013021.hg.1
This assay targets the same location as HTA transcript cluster(s) TC11000541.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK312761.1,BC000323.2,NM_004111.5,X76771.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene FEN1

Panther Classification:

Molecular Function -

exodeoxyribonuclease

Gene Ontology Categories:

Process(es)

telomere maintenance via recombination
double-strand break repair via homologous recombination
DNA replication
DNA repair
base-excision repair
double-strand break repair
memory
UV protection
DNA replication, removal of RNA primer
RNA phosphodiester bond hydrolysis, endonucleolytic

Function(s)

magnesium ion binding
DNA binding
damaged DNA binding
double-stranded DNA binding
endonuclease activity
RNA-DNA hybrid ribonuclease activity
exonuclease activity
protein binding
double-stranded DNA exodeoxyribonuclease activity
5'-3' exonuclease activity
5'-flap endonuclease activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR11006561.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11006561.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11006561.hg.1	TC11000541.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR11006563.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11006563.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11006563.hg.1	TC11000541.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0100009017.hg.1	ENST00000401028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000535307.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000535307.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000535723.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000535723.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	ENST00000535723.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11006560.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11006560.hg.1	NM_004111.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11006560.hg.1	TC11000541.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1100200842.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200842.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100200842.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200842.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100200842.hg.1	TC1100013021.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100200844.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200844.hg.1	ENST00000535723.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200844.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100200844.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200844.hg.1	ENST00000535723.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200844.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100200844.hg.1	TC1100013021.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0100009017.hg.1	ENST00000401028.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200843.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200843.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100200843.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200843.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100200843.hg.1	TC1100013021.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1100200847.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200847.hg.1	ENST00000535723.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200847.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100200847.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200847.hg.1	ENST00000535723.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100200847.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	PSR1100200847.hg.1	TC1100013021.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000305885.2	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000535307.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000535307.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000535723.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000535723.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	ENST00000535723.1	Ensembl
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	NM_004111.5	Refseq
Affymetrix Human Clariom D Assay	TC1100013021.hg.1	NM_004111.5	Refseq