Hs01099604_m1

• Gene Symbol: PTPRN
• Gene Name: protein tyrosine phosphatase, receptor type N
• Gene Aliases: IA-2, IA-2/PTP, IA2, ICA512, R-PTP-N
• Chromosome Location: Chr.2: 219289623 - 219309573 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PTPRN
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001199763.1	NP_001186692.1	8 - 9	1403		104
	NM_001199764.1	NP_001186693.1	8 - 9	1173		104
	NM_002846.3	NP_002837.1	8 - 9	1403		104
	XM_011511566.1	XP_011509868.1	8 - 9	1252		104
	XM_017004609.1	XP_016860098.1	8 - 9	1255		104
	XM_017004610.1	XP_016860099.1	8 - 9	1255		104
	XM_017004611.1	XP_016860100.1	8 - 9	1255		104
	XM_017004612.1	XP_016860101.1	8 - 9	1252		104
GenBank mRNA	AB209368.1	-	6 - 7	1636		104
	AK291469.1	-	8 - 9	1328		104
	AK296335.1	-	8 - 9	1150		104
	AK314574.1	-	8 - 9	1167		104
	BC007713.2	-	4 - 5	658		104
	BC070053.1	-	8 - 9	1229	5312712	104
	L18983.1	-	8 - 9	1235		104
	X62899.2	-	6 - 7	925		104

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200015773.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02002794.hg.1

Additional Information:

This assay is in the 5'UTR region of the X62899.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Protein Phosphatase, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTPRN

Panther Classification:

Molecular Function -

protein phosphatase, protein modifying enzyme

Gene Ontology Categories:

Process(es)

response to reactive oxygen species
luteinization
cytokine-mediated signaling pathway
insulin secretion
response to insulin
insulin secretion involved in cellular response to glucose stimulus
response to estrogen
response to cAMP
dense core granule maturation

Function(s)

protein tyrosine phosphatase activity
protein binding
spectrin binding
GTPase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02045144.hg.1	TC02002794.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02045144.hg.1	ENST00000295718.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02045144.hg.1	ENST00000409251.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02045144.hg.1	ENST00000537666.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02045144.hg.1	ENST00000539342.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02045144.hg.1	NM_001199763.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02045144.hg.1	NM_001199764.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02045144.hg.1	NM_002846.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	ENST00000295718.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	ENST00000409251.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	ENST00000423636.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	ENST00000462351.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	NM_001199763.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	NM_001199764.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	NM_002846.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	ENST00000295718.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	ENST00000409251.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	ENST00000423636.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	ENST00000462351.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	NM_001199763.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	NM_001199764.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	NM_002846.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200216092.hg.1	TC0200015773.hg.1	Clariom D TC