Hs01104822_g1

• Gene Symbol: DCAF1
• Gene Name: DDB1 and CUL4 associated factor 1
• Gene Aliases: VPRBP
• Chromosome Location: Chr.3: 51395867 - 51505620 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: DCAF1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001171904.1	NP_001165375.1	19 - 20	4067		96
	NM_014703.2	NP_055518.1	20 - 21	4117		96
	XM_005276753.4	XP_005276810.1	18 - 19	3948		96
	XM_005276755.4	XP_005276812.1	19 - 20	4029		96
	XM_011534273.2	XP_011532575.1	21 - 22	4208		96
	XM_011534274.2	XP_011532576.1	21 - 22	4268		96
	XM_011534275.2	XP_011532577.1	21 - 22	4183		96
	XM_011534276.2	XP_011532578.1	21 - 22	4230		96
	XM_011534277.2	XP_011532579.1	19 - 20	4101		96
	XM_017007546.1	XP_016863035.1	20 - 21	4126		96
	XM_017007547.1	XP_016863036.1	20 - 21	4083		96
	XM_017007548.1	XP_016863037.1	20 - 21	4218		96
	XM_017007549.1	XP_016863038.1	21 - 22	4268		96
	XM_017007550.1	XP_016863039.1	21 - 22	4268		96
	XM_017007551.1	XP_016863040.1	18 - 19	3978		96
GenBank mRNA	AB018343.1	-	20 - 21	4100		96
	AF061935.1	-	15 - 16	3615		96
	AL080145.1	-	11 - 12	2812		96
	BC022792.1	-	15 - 16	2784	4853730	96
	BC110371.1	-	19 - 20	4057	5547856	96

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300011135.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03001436.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene DCAF1

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
viral process
protein ubiquitination
B cell differentiation
V(D)J recombination
cell competition in a multicellular organism
histone H2A-T120 phosphorylation

Function(s)

protein binding
ATP binding
histone kinase activity (H2A-T120 specific)

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03025949.hg.1	TC03001436.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03025949.hg.1	ENST00000335891.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03025949.hg.1	NM_001171904.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03025949.hg.1	NM_014703.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	ENST00000335891.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	ENST00000423656.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	ENST00000504652.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	NM_001171904.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	NM_014703.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	ENST00000335891.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	ENST00000423656.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	ENST00000504652.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	NM_001171904.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	NM_014703.2	Refseq
Affymetrix Human Clariom D Assay	PSR0300182992.hg.1	TC0300011135.hg.1	Clariom D TC