Hs01106337_m1

• Gene Symbol: PHGDH
• Gene Name: phosphoglycerate dehydrogenase
• Gene Aliases: 3-PGDH, 3PGDH, HEL-S-113, NLS, NLS1, PDG, PGAD, PGD, PGDH, PHGDHD, SERA
• Chromosome Location: Chr.1: 119711737 - 119744226 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PHGDH
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006623.3	NP_006614.2	5 - 6	733		97
	XM_011541226.1	XP_011539528.1	7 - 8	1014		97
	XM_011541227.2	XP_011539529.1	7 - 8	719		97
	XM_011541228.1	XP_011539530.1	7 - 8	632		97
	XM_011541231.2	XP_011539533.1	7 - 8	836		97
GenBank mRNA	AF171236.1	-	2 - 3	123		97
	AF171237.1	-	5 - 6	579		97
	AK093306.1	-	4 - 5	1911		97
	AK309662.1	-	7 - 8	927		97
	AK310132.1	-	6 - 7	684		97
	AK315360.1	-	5 - 6	654		97
	BC000303.2	-	5 - 6	573	2820369	97
	BC001349.2	-	5 - 6	568	2961389	97
	BC011262.1	-	5 - 6	642	4156703	97
	BC023235.1	-	5 - 6	546		97
	CR456795.1	-	5 - 6	506		97
	FJ224347.1	-		1198		97

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100009621.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01001043.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PHGDH

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

glutamine metabolic process
glycine metabolic process
L-serine biosynthetic process
threonine metabolic process
brain development
serine family amino acid biosynthetic process
gamma-aminobutyric acid metabolic process
regulation of gene expression
taurine metabolic process
spinal cord development
glial cell development
neural tube development
neuron projection development
oxidation-reduction process
G1 to G0 transition

Function(s)

phosphoglycerate dehydrogenase activity
electron carrier activity
NAD binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01016524.hg.1	TC01001043.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01016524.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01016524.hg.1	ENST00000369409.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01016524.hg.1	ENST00000535091.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01016524.hg.1	ENST00000537497.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01016524.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000496756.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000496756.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000496756.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000496756.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	ENST00000496756.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01016523.hg.1	TC01001043.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01016523.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01016523.hg.1	ENST00000369409.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01016523.hg.1	ENST00000535091.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01016523.hg.1	ENST00000537497.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01016523.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000462324.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000482968.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000496756.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000496756.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000496756.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000496756.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	ENST00000496756.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	TC0100009621.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	ENST00000493622.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100169261.hg.1	TC0100009621.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100169262.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169262.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169262.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169262.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100169262.hg.1	ENST00000369407.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169262.hg.1	ENST00000369409.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169262.hg.1	ENST00000469443.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100169262.hg.1	NM_006623.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100169262.hg.1	TC0100009621.hg.1	Clariom D TC