Hs01108626_g1

• Gene Symbol: SMCHD1
• Gene Name: structural maintenance of chromosomes flexible hinge domain containing 1
• Gene Aliases: -
• Chromosome Location: Chr.18: 2655887 - 2805017 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SMCHD1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015295.2	NP_056110.2	31 - 32	4203		134
	XM_011525642.1	XP_011523944.1	31 - 32	4203		134
	XM_011525643.2	XP_011523945.1	31 - 32	4203		134
	XM_011525644.2	XP_011523946.1	30 - 31	4111		134
	XM_017025684.1	XP_016881173.1	32 - 33	4381		134
GenBank mRNA	AB014550.1	-	5 - 6	545		134
	AK126324.1	-	16 - 17	1834		134
	AL080138.1	-	2 - 3	183		134
	CR627458.1	-	20 - 21	2427		134

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1800006487.hg.1
This assay targets the same location as HTA transcript cluster(s) TC18000011.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Detect Genomic DNA, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

chromosome organization
inactivation of X chromosome by DNA methylation

Function(s)

ATP binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR18000136.hg.1	ENST00000261598.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18000136.hg.1	ENST00000320876.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR18000136.hg.1	NM_015295.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR18000136.hg.1	TC18000011.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1800144454.hg.1	ENST00000320876.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1800144454.hg.1	ENST00000577880.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800144454.hg.1	ENST00000584897.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800144454.hg.1	NM_015295.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800144454.hg.1	ENST00000320876.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1800144454.hg.1	ENST00000577880.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800144454.hg.1	ENST00000584897.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1800144454.hg.1	NM_015295.2	Refseq
Affymetrix Human Clariom D Assay	PSR1800144454.hg.1	TC1800006487.hg.1	Clariom D TC