Hs01108839_m1

• Gene Symbol: SEMA6C
• Gene Name: semaphorin 6C
• Gene Aliases: SEMAY, m-SemaY, m-SemaY2
• Chromosome Location: Chr.1: 151131685 - 151148408 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SEMA6C
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001178061.1	NP_001171532.1	6 - 7	689		78
	NM_001178062.1	NP_001171533.1	6 - 7	689		78
	NM_030913.4	NP_112175.2	6 - 7	689		78
	XM_005244835.3	XP_005244892.1	6 - 7	693		78
	XM_017000075.1	XP_016855564.1	6 - 7	1100		78
	XM_017000076.1	XP_016855565.1	6 - 7	1110		78
	XM_017000077.1	XP_016855566.1	7 - 8	2022		78
	XM_017000078.1	XP_016855567.1	5 - 6	1689		78
	XM_017000079.1	XP_016855568.1	7 - 8	2022		78
	XM_017000080.1	XP_016855569.1	5 - 6	1689		78
	XM_017000081.1	XP_016855570.1	7 - 8	2022		78
GenBank mRNA	AB022434.1	-	6 - 7	540		78
	AB058772.1	-	6 - 7	2045		78
	AF339152.1	-	6 - 7	482		78
	AF339154.1	-	6 - 7	482		78
	AK302862.1	-	6 - 7	656		78
	AK311613.1	-	5 - 6	484		78
	BC114521.1	-	5 - 6	429	40036286	78
	BC114623.1	-	5 - 6	429	40036285	78

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100015771.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003219.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SEMA6C

Panther Classification:

Molecular Function -

membrane-bound signaling molecule, intercellular signal molecule

Gene Ontology Categories:

Process(es)

neural crest cell migration
axon guidance
positive regulation of cell migration
negative regulation of axon extension involved in axon guidance
negative chemotaxis
semaphorin-plexin signaling pathway

Function(s)

semaphorin receptor binding
chemorepellent activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01049500.hg.1	TC01003219.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01049500.hg.1	ENST00000341697.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01049500.hg.1	ENST00000368912.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01049500.hg.1	ENST00000368913.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01049500.hg.1	ENST00000368914.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01049500.hg.1	ENST00000392792.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01049500.hg.1	NM_001178061.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01049500.hg.1	NM_001178062.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01049500.hg.1	NM_030913.4	Refseq
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000341697.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000368912.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000368913.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000368914.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000485745.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000613223.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000621728.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	NM_001178061.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	NM_001178062.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	NM_030913.4	Refseq
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000341697.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000368912.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000368913.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000368914.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000485745.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000613223.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	ENST00000621728.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	NM_001178061.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	NM_001178062.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	NM_030913.4	Refseq
Affymetrix Human Clariom D Assay	PSR0100218274.hg.1	TC0100015771.hg.1	Clariom D TC