Hs01115662_m1

• Gene Symbol: TNC
• Gene Name: tenascin C
• Gene Aliases: 150-225, DFNA56, GMEM, GP, HXB, JI, TN, TN-C
• Chromosome Location: Chr.9: 115019575 - 115118257 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TNC
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_002160.3	NP_002151.2	25 - 26	6584		78
	XM_005251972.3	XP_005252029.1	24 - 25	6261		78
	XM_005251973.3	XP_005252030.1	21 - 22	5442		78
	XM_005251974.3	XP_005252031.1	19 - 20	4896		78
	XM_005251975.3	XP_005252032.1	18 - 19	4623		78
	XM_006717096.3	XP_006717159.1	26 - 27	6810		78
	XM_006717097.3	XP_006717160.1	24 - 25	6261		78
	XM_006717098.3	XP_006717161.1	23 - 24	5988		78
	XM_006717101.3	XP_006717164.1	19 - 20	4896		78
	XM_011518625.2	XP_011516927.1	23 - 24	5988		78
	XM_011518626.2	XP_011516928.1	22 - 23	5718		78
	XM_011518628.2	XP_011516930.1	20 - 21	5169		78
	XM_011518629.2	XP_011516931.1	20 - 21	5169		78
	XM_017014678.1	XP_016870167.1	27 - 28	7083		78
	XM_017014679.1	XP_016870168.1	26 - 27	6810		78
	XM_017014680.1	XP_016870169.1	26 - 27	6807		78
	XM_017014681.1	XP_016870170.1	23 - 24	5991		78
GenBank mRNA	AB210038.1	-	25 - 26	6460		78
	BC151843.1	-	22 - 23	5633	8860362	78
	GU473235.1	-	20 - 21			84
	M55618.1	-	24 - 25			84
	X56160.1	-	24 - 25	6223		78
	X78565.1	-	25 - 26	6485		78

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900011305.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001517.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TNC

Panther Classification:

Molecular Function -

extracellular matrix protein

Gene Ontology Categories:

Process(es)

osteoblast differentiation
cell adhesion
negative regulation of cell adhesion
neuromuscular junction development
positive regulation of cell proliferation
response to wounding
response to mechanical stimulus
positive regulation of gene expression
peripheral nervous system axon regeneration
extracellular matrix organization
wound healing
odontogenesis of dentin-containing tooth
response to ethanol
bud outgrowth involved in lung branching
mesenchymal-epithelial cell signaling involved in prostate gland development
prostate gland epithelium morphogenesis
cellular response to retinoic acid
cellular response to vitamin D
response to fibroblast growth factor
cellular response to prostaglandin D stimulus

Function(s)

syndecan binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	TC09001517.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	ENST00000340094.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	ENST00000341037.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	ENST00000345230.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	ENST00000346706.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	ENST00000350763.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	ENST00000423613.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	ENST00000535648.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	ENST00000537320.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	ENST00000542877.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09019001.hg.1	NM_002160.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000341037.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000350763.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000423613.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000535648.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000537320.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000542877.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	NM_002160.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000341037.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000350763.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000423613.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000535648.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000537320.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	ENST00000542877.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	NM_002160.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900177106.hg.1	TC0900011305.hg.1	Clariom D TC