Hs01122837_m1

Gene Symbol:

PTCD1 ATP5J2-PTCD1

Gene Name:

pentatricopeptide repeat domain 1

ATP5J2-PTCD1 readthrough

Gene Aliases:

-

-

Chromosome Location:

Chr.7: 99416739 - 99438839 on Build GRCh38

Chromosome Location:

Chr.7: 99416739 - 99466201 on Build GRCh38

Species:

Human

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: PTCD1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015545.3	NP_056360.2	3 - 4	762		64
GenBank mRNA	AB014532.1	-	3 - 4	670		64
	AK001615.1	-	3 - 4	677		64
	AK291004.1	-	3 - 4	653		64
	BC003688.1	-	2 - 3	275		64
	BC080580.1	-	3 - 4	710	6645909	64
	BC103495.1	-	3 - 4	687	40011658	64
	BC103502.1	-	3 - 4	687	40011661	64

Gene Symbol: ATP5J2-PTCD1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001198879.1	NP_001185808.1	4 - 5	795		64
GenBank mRNA	AK295912.1	-	4 - 5	758		64

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700013590.hg.1, TC0700013592.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07003365.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PTCD1
Click here to find siRNAs for Gene ATP5J2-PTCD1

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

tRNA 3'-end processing

Function(s)

tRNA binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000430029.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000430029.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000430029.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000430029.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000430029.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000430982.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000430982.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000430982.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000430982.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000437572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000437572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000437572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000437572.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000451138.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000451138.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	ENST00000451138.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07025060.hg.1	TC07003365.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07025060.hg.1	ENST00000292478.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07025060.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07025060.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700201289.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700201289.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700201289.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700201289.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700201289.hg.1	TC0700013592.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000419981.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000430029.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000430029.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000430029.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000430029.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000430029.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	TC0700013590.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700201238.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700201238.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700201238.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700201238.hg.1	ENST00000292478.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700201238.hg.1	ENST00000485746.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700201238.hg.1	NM_015545.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700201238.hg.1	TC0700013590.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000413834.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000430982.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000430982.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000430982.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000430982.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000437572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000437572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000437572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000437572.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000451138.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000451138.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	ENST00000451138.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq
Affymetrix Human Clariom D Assay	TC0700013592.hg.1	NM_001198879.1	Refseq