Hs01128005_m1

• Gene Symbol: SENP6
• Gene Name: SUMO1/sentrin specific peptidase 6
• Gene Aliases: SSP1, SUSP1
• Chromosome Location: Chr.6: 75601509 - 75718285 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SENP6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001100409.2	NP_001093879.1	17 - 18	3290		147
	NM_015571.3	NP_056386.2	18 - 19	3311		147
	XM_006715457.3	XP_006715520.1	19 - 20	3065		147
	XM_011535746.2	XP_011534048.1	17 - 18	2863		147
	XM_011535747.2	XP_011534049.1	17 - 18	3214		147
	XM_017010719.1	XP_016866208.1	18 - 19	2953		147
	XM_017010720.1	XP_016866209.1	18 - 19	2269		147
	XM_017010721.1	XP_016866210.1	18 - 19	2277		147
	XM_017010722.1	XP_016866211.1	19 - 20	3084		147
	XM_017010723.1	XP_016866212.1	19 - 20	3061		147
	XM_017010724.1	XP_016866213.1	19 - 20	3436		147
	XM_017010725.1	XP_016866214.1	16 - 17	3196		147
GenBank mRNA	AB018340.2	-	18 - 19	2339		147
	AF196304.1	-	18 - 19	2295		147
	AF306508.1	-	18 - 19	2310		147
	AF307849.1	-	18 - 19	2370		147
	AK021949.1	-	2 - 3	234		147
	AK126921.1	-	17 - 18	3290		147
	BC028583.1	-	17 - 18	2497	4838569	147

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600008562.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000745.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK021949.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SENP6

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

protein sumoylation
protein desumoylation
protein modification by small protein removal
regulation of spindle assembly
regulation of kinetochore assembly

Function(s)

protein binding
SUMO-specific protease activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06008968.hg.1	TC06000745.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06008968.hg.1	ENST00000370010.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06008968.hg.1	ENST00000370014.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06008968.hg.1	ENST00000447266.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06008968.hg.1	ENST00000538088.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06008968.hg.1	ENST00000541192.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06008968.hg.1	NM_001100409.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06008968.hg.1	NM_015571.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06008969.hg.1	TC06000745.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06008969.hg.1	ENST00000370010.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06008969.hg.1	ENST00000370014.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06008969.hg.1	ENST00000447266.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06008969.hg.1	ENST00000538088.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06008969.hg.1	ENST00000541192.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06008969.hg.1	NM_001100409.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06008969.hg.1	NM_015571.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600159564.hg.1	ENST00000370010.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600159564.hg.1	ENST00000447266.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600159564.hg.1	NM_001100409.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600159564.hg.1	NM_015571.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600159564.hg.1	ENST00000370010.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600159564.hg.1	ENST00000447266.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600159564.hg.1	NM_001100409.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600159564.hg.1	NM_015571.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600159564.hg.1	TC0600008562.hg.1	Clariom D TC