LOC284080
Genomic Map
Back To TopAssay Details
| Gene Symbol: LOC284080 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_038230.1 | 2 - 3 | 246 | 110 | ||
| GenBank mRNA | AK096761.1 | - | 2 - 3 | 246 | 110 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | distal-less homeobox 3 | DLX3 |
AI4, TDO |
-55.1kb | Sense | Chr. 17 - 49990005 - 49995224 on NCBI Build GRCh38 |
| Downstream | integrin subunit alpha 3 | ITGA3 |
CD49C, FRP-2, GAP-B3, GAPB3, ILNEB, MSK18, VCA-2, VL3A, VLA3a |
2.3kb | Anti-sense | Chr. 17 - 50055968 - 50090485 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1700011078.hg.1This assay targets the same location as HTA transcript cluster(s) TC17001676.hg.1
Set Membership: |
Amplicon length greater than or equal to 101
3' Most
Homo sapiens
1700
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356717 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P16994571 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356718 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356711 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356712 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356723 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356705 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356713 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356704 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356702 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356709 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P30934609 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356716 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356707 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P30934614 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356722 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356714 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356706 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P10356719 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 842427 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 555632 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 666685 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 331211 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3477521 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 56883 | - | - |
| Agilent Human Genome CGH + SNP Microarray | A_16_P03256091 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3477521 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3477521 | - | - |
| Agilent Human Genome 244K CGH Microarray (Alpha Test) | A_16_P03256091 | - | - |
| Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522 | 180137 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P03256091 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_18_P12668153 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P03256087 | - | - |
| Agilent Human 1B Microarray G4111A | A_32_P355737 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 2x400K | A_16_P03256091 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT HG-U133+ PM Array Plate | 1557607_PM_at | - | - |
| Affymetrix HT HG-U133+ PM Array Plate | 1557608_PM_a_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022522.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022522.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022522.hg.1 | TC17001676.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022520.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022520.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022520.hg.1 | TC17001676.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011078.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011078.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011078.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011078.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011078.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011078.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011078.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011078.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011078.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1700011078.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022521.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022521.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR17022521.hg.1 | TC17001676.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR1700189133.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189133.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189133.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189133.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189133.hg.1 | TC1700011078.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1700189137.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189137.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189137.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189137.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189137.hg.1 | TC1700011078.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC1700011078.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011078.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011078.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011078.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011078.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1700011078.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700011078.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700011078.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700011078.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1700011078.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189135.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189135.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189135.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189135.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189135.hg.1 | TC1700011078.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1700189131.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189131.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189131.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189131.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189131.hg.1 | TC1700011078.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1700189132.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189132.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189132.hg.1 | ENST00000499842.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1700189132.hg.1 | NR_038230.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1700189132.hg.1 | TC1700011078.hg.1 | Clariom D TC |
| Human Genome U133 Plus 2.0 Array | 1557607_PM_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1557608_PM_a_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1557608_a_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1557607_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557608_a_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557607_at5 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A008550 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A008550 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 230146 | - | - |
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