LOC341056
Genomic Map
Back To TopAssay Details
| Gene Symbol: LOC341056 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_027288.1 | 1 | 914 | 80 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | brain specific homeobox | BSX | BSX1 | -35.9kb | Anti-sense | Chr. 11 - 122977649 - 122981671 on NCBI Build GRCh38 |
| Downstream | heat shock protein family A (Hsp70) member 8 | HSPA8 |
HEL-33, HEL-S-72p, HSC54, HSC70, HSC71, HSP71, HSP73, HSPA10, LAP-1, LAP1, NIP71 |
37.9kb | Anti-sense | Chr. 11 - 123057492 - 123062366 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1100009339.hg.1This assay targets the same location as HTA transcript cluster(s) TC11001119.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Human Genome Oligo Microarray 4x44K | 3093 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085149 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085153 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085163 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085120 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512723 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512726 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085141 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085155 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085143 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085119 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512688 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085121 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512732 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512709 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16511339 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512715 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16511352 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085161 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085164 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085136 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16511338 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512718 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16511340 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085130 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512714 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085123 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512711 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085126 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085146 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512687 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085129 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085160 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512712 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512700 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085151 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085117 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085158 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512744 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085124 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085156 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512707 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512711 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085129 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512715 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085155 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16511339 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16511352 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512687 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085153 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085130 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085120 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512732 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085160 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085136 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085164 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512700 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512688 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085149 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085163 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085156 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512718 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085151 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512712 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085119 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085146 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512744 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16511338 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16511340 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512714 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512726 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085121 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512723 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085141 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085161 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085117 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512707 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P28512709 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085126 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085143 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085124 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085123 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P08085158 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085179 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085160 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085117 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16511359 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085142 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085124 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085178 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085170 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085181 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16511340 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085172 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16511339 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16511342 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085126 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085163 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16511349 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085150 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085155 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085143 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085138 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085136 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085119 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16511346 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085140 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085129 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085146 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085164 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085176 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085130 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085156 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085153 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16511338 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085167 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P08085121 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR11014248.hg.1 | NR_027288.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11014248.hg.1 | TC11001119.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR1100170099.hg.1 | ENST00000532044.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100170099.hg.1 | NR_027288.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100170099.hg.1 | ENST00000532044.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100170099.hg.1 | NR_027288.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100170099.hg.1 | TC1100009339.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1100170098.hg.1 | NR_027288.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100170098.hg.1 | NR_027288.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100170098.hg.1 | TC1100009339.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1100170101.hg.1 | NR_027288.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100170101.hg.1 | NR_027288.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100170101.hg.1 | TC1100009339.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1100170100.hg.1 | NR_027288.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100170100.hg.1 | NR_027288.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100170100.hg.1 | TC1100009339.hg.1 | Clariom D TC |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A047061 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A047060 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A047060 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A047061 | - | - |
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