Name: [Hs01384431_g1] [PAXIP1-AS2]
Creator: Thermo Fisher Scientific
Keywords: [PAXIP1-AS2] Assay, [PAXIP1 antisense RNA 2] Assay

Assay Details

Gene Symbol: PAXIP1-AS2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_024476.1		1 - 2	256		93
RefSeq	NR_024477.1		1 - 2	256		93
GenBank mRNA	AK056609.1	-	1 - 2	246		93
	BC033053.1	-	1 - 2	282		93
	BC050402.1	-	1 - 2	241		93

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DB161451.1	-	1 - 2	253	Chr. 7 - 154928520 - 154944284 [+] on Build GRCh38	93
GenBankmRNA	BX377778.2	-	1 - 2	256	Chr. 7 - 154928517 - 154944724 [+] on Build GRCh38	93
GenBankmRNA	DA990117.1	-	1 - 2	267	Chr. 7 - 154928506 - 154944233 [+] on Build GRCh38	93
GenBankmRNA	DA428625.1	-	1 - 2	308	Chr. 7 - 154928466 - 154944224 [+] on Build GRCh38	93
GenBankmRNA	BM549692.1	-	1 - 2	261	Chr. 7 - 154928516 - 154944617 [+] on Build GRCh38	93
GenBankmRNA	BE748183.1	-		250	Chr. - - [-] on Build	93
GenBankmRNA	DA640619.1	-	1 - 2	269	Chr. 7 - 154928504 - 154944230 [+] on Build GRCh38	93
GenBankmRNA	DA611646.1	-	1 - 2	278	Chr. 7 - 154928496 - 154944264 [+] on Build GRCh38	93
GenBankmRNA	DA421500.1	-	1 - 2	289	Chr. 7 - 154928484 - 154944249 [+] on Build GRCh38	93
GenBankmRNA	BF849788.1	-	1 - 2	121	Chr. 7 - 154928663 - 154944368 [+] on Build GRCh38	93
GenBankmRNA	DB013789.1	-	1 - 2	270	Chr. 7 - 154928504 - 154944273 [+] on Build GRCh38	93
GenBankmRNA	DA996509.1	-	1 - 2	248	Chr. 7 - 154928528 - 154944264 [+] on Build GRCh38	93
GenBankmRNA	DN997682.1	-	1 - 2	263	Chr. 7 - 154928519 - 154944247 [+] on Build GRCh38	93
GenBankmRNA	CA389913.1	-	1 - 2	118	Chr. 7 - 154928655 - 154946448 [+] on Build GRCh38	93
GenBankmRNA	DA268497.1	-	1 - 2	294	Chr. 7 - 154928481 - 154944236 [+] on Build GRCh38	93
GenBankmRNA	DB217206.1	-	1 - 2	253	Chr. 7 - 154928520 - 154944203 [+] on Build GRCh38	93
GenBankmRNA	DA224698.1	-	1 - 2	283	Chr. 7 - 154928490 - 154944328 [+] on Build GRCh38	93
GenBankmRNA	DA595771.1	-	1 - 2	254	Chr. 7 - 154928520 - 154944275 [+] on Build GRCh38	93
GenBankmRNA	DA761780.1	-	1 - 2	246	Chr. 7 - 154928528 - 154944283 [+] on Build GRCh38	93
GenBankmRNA	BX356348.2	-	1 - 2	256	Chr. 7 - 154928517 - 154944683 [+] on Build GRCh38	93
GenBankmRNA	DA252464.1	-	1 - 2	305	Chr. 7 - 154928469 - 154944252 [+] on Build GRCh38	93
GenBankmRNA	DB112724.1	-	1 - 2	248	Chr. 7 - 154928528 - 154944293 [+] on Build GRCh38	93
GenBankmRNA	BI545751.1	-	1 - 2	282	Chr. 7 - 154928494 - 154929006 [+] on Build GRCh38	93
GenBankmRNA	D81902.1	-	1 - 2		Chr. 7 - 154928693 - 154944371 [+] on Build GRCh38	93
GenBankmRNA	BF212893.1	-	1 - 2		Chr. 7 - 154928450 - 154930657 [+] on Build GRCh38	92

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	dipeptidyl peptidase like 6	DPP6	DPL1, DPPX, MRD33, VF2	-34.2kb	Sense	Chr. 7 - 153747986 - 154894290 on NCBI Build GRCh38
Downstream	PAX interacting protein 1	PAXIP1	CAGF28, CAGF29, PACIP1, PAXIP1L, PTIP, TNRC2	14.7kb	Anti-sense	Chr. 7 - 154943690 - 155003393 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700009790.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07001033.hg.1

Set Membership:

Amplicon length between 86 and 100

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07016018.hg.1	TC07001033.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07016018.hg.1	ENST00000397551.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07016018.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07016018.hg.1	NR_024477.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07016019.hg.1	TC07001033.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07016019.hg.1	ENST00000397551.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07016019.hg.1	NR_024476.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07016019.hg.1	NR_024477.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	NR_024477.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	NR_024477.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700169727.hg.1	TC0700009790.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	NR_024477.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	NR_024477.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700169726.hg.1	TC0700009790.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000397551.6	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000411526.5	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	ENST00000449486.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024476.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024477.1	Refseq
Affymetrix Human Clariom D Assay	TC0700009790.hg.1	NR_024477.1	Refseq

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Catalog #	4426961
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System Message

Genomic Map