LOC340107
Genomic Map
Back To TopAssay Details
| Gene Symbol: LOC340107 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_037896.1 | 2 - 3 | 420 | 93 | ||
| GenBank mRNA | BC040315.1 | - | 2 - 3 | 420 | 93 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | cadherin 10 | CDH10 | -190.3kb | Sense | Chr. 5 - 24487100 - 24644978 on NCBI Build GRCh38 | |
| Downstream | uncharacterized LOC105374693 | LOC105374693 | 351.7kb | Anti-sense | Chr. 5 - 25190953 - 25302280 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0500010313.hg.1This assay targets the same location as HTA transcript cluster(s) TC05001206.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Mammalian Gene Collection
Homo sapiens
1700
Probe spans exons
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994721 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994657 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994697 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824306 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994711 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994653 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994708 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994643 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994648 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824247 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994738 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824319 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994709 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824316 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994713 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994702 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994719 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824248 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994650 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824289 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994658 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824253 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994699 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824270 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994726 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994681 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824322 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994733 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994671 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994652 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15676239 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994732 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994674 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994723 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994675 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994667 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994737 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994656 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824296 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994673 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994707 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824298 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994698 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994668 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994730 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994734 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824267 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994717 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994725 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824309 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824275 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994728 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824235 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824269 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994731 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994695 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994644 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994694 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994678 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994693 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824291 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994716 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994672 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824246 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994700 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824303 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994659 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824268 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994704 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994714 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824287 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994676 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824304 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P03824254 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994664 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23994692 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 4x180K | 164992 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 190510 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 503519 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 686700 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3667419 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 16262 | - | - |
| Agilent Human Genome CGH + SNP Microarray | A_16_P01198036 | - | - |
| Agilent Human Genome CGH + SNP Microarray | A_16_P01198036 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3667419 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3667419 | - | - |
| Agilent Human Genome CGH Microarray 105A (G4412A) | A_16_P01198036 | - | - |
| Agilent Human Genome 244K CGH Microarray (Alpha Test) | A_16_P01198036 | - | - |
| Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522 | 163368 | - | - |
| Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015 | 47991 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P01198036 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P17062762 | - | - |
| Agilent SurePrint G3 Human CGH Microarray 2x400K | A_16_P01198036 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT HG-U133+ PM Array Plate | 1557008_PM_at | - | - |
| Affymetrix HT HG-U133+ PM Array Plate | 1557009_PM_a_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR05017123.hg.1 | TC05001206.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR05017123.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR05017123.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR05017124.hg.1 | TC05001206.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR05017124.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR05017124.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR05017125.hg.1 | TC05001206.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR05017125.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR05017125.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0500010313.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171909.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171909.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171909.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171909.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171909.hg.1 | TC0500010313.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0500171905.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171905.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171905.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171905.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171905.hg.1 | TC0500010313.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0500171910.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171910.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171910.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171910.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171910.hg.1 | TC0500010313.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0500171911.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171911.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171911.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171911.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171911.hg.1 | TC0500010313.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0500171906.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171906.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171906.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171906.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171906.hg.1 | TC0500010313.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0500171907.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171907.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171907.hg.1 | ENST00000504339.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0500171907.hg.1 | NR_037896.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0500171907.hg.1 | TC0500010313.hg.1 | Clariom D TC |
| Human Genome U133 Plus 2.0 Array | 1557009_PM_a_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1557008_PM_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1557008_at | - | - |
| Human Genome U133 Plus 2.0 Array | 1557009_a_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557009_a_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 1557008_at5 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A026614 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A026614 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Human Genome Survey Microarray Version 2.0 | 245704 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina human-6 v2.0 expression beadchip | ILMN_1840923 | - | - |
| Illumina Sentrix Human-6 v2 Expression BeadChip | 6900241 | - | - |
| Illumina HumanRef-6 v2.0 expression beadchip | ILMN_78165 | - | - |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1840923 | - | - |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1840923 | - | - |
| Illumina HumanWG-6_V2_0_R2 | ILMN_1840923 | - | - |
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