Hs01548084_g1 Best Coverage

• Gene Symbol: PCBD1
• Gene Name: pterin-4 alpha-carbinolamine dehydratase 1
• Gene Aliases: DCOH, PCBD, PCD, PHS
• Chromosome Location: Chr.10: 70882280 - 70888786 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PCBD1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000281.3	NP_000272.1	2 - 3	387		68
	NM_001289797.1	NP_001276726.1	2 - 3	533		68
	NM_001323004.1	NP_001309933.1	2 - 3	387		68
GenBank mRNA	AA397961.1	-	1 - 2	148		68
	AF082858.1	-	2 - 3	207		68
	BC006324.2	-	2 - 3	152	4138350	68
	BI548743.1	-	2 - 3	538		68
	BM724638.1	-	1 - 2	97		68
	BQ685076.1	-		385		68
	BQ897536.1	-	2 - 3	417		68
	CR542194.1	-	1 - 2	134		68
	HY292808.1	-	2 - 3			68
	L41559.1	-	2 - 3	154		68
	M83742.1	-	1 - 2	135		68

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000010930.hg.1
This assay targets the same location as HTA transcript cluster(s) TC10001369.hg.1

Additional Information:

This assay is in the 5'UTR region of the NM_001289797.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PCBD1

Panther Classification:

Molecular Function -

dehydratase

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
L-phenylalanine catabolic process
tetrahydrobiopterin biosynthetic process
regulation of protein homodimerization activity
positive regulation of transcription, DNA-templated
protein homotetramerization
protein heterooligomerization
oxidation-reduction process

Function(s)

transcription coactivator activity
phenylalanine 4-monooxygenase activity
protein binding
4-alpha-hydroxytetrahydrobiopterin dehydratase activity
identical protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR10017338.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10017338.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10017338.hg.1	NM_000281.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10017338.hg.1	TC10001369.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000493961.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000493961.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	ENST00000493961.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	ENST00000493961.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	NM_000281.3	Refseq
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	NM_001289797.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	ENST00000493961.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	NM_000281.3	Refseq
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	NM_001289797.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000174420.hg.1	TC1000010930.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1000174423.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000174423.hg.1	NM_001289797.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000174423.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000174423.hg.1	NM_001289797.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000174423.hg.1	TC1000010930.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000299299.3	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000493228.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000493961.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000493961.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	ENST00000493961.5	Ensembl
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_000281.3	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_001289797.1	Refseq
Affymetrix Human Clariom D Assay	TC1000010930.hg.1	NM_001289797.1	Refseq