Hs01549969_g1

• Gene Symbol: FN1
• Gene Name: fibronectin 1
• Gene Aliases: CIG, ED-B, FINC, FN, FNZ, GFND, GFND2, LETS, MSF
• Chromosome Location: Chr.2: 215360440 - 215436167 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: FN1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001306129.1	NP_001293058.1	44 - 45	7324		72
	NM_001306130.1	NP_001293059.1	42 - 43	6787		72
	NM_001306131.1	NP_001293060.1	42 - 43	6781		72
	NM_001306132.1	NP_001293061.1	42 - 43	6706		72
	NM_002026.3	NP_002017.1	43 - 44	7049		72
	NM_212474.2	NP_997639.1	41 - 42	6512		72
	NM_212476.2	NP_997641.1	41 - 42	6872		72
	NM_212478.2	NP_997643.1	43 - 44	6974		72
	NM_212482.2	NP_997647.1	43 - 44	7415		72
	XM_005246397.1	XP_005246454.1	43 - 44	7514		72
	XM_005246398.1	XP_005246455.1	43 - 44	7439		72
	XM_005246399.1	XP_005246456.1	44 - 45	7421		72
	XM_005246401.1	XP_005246458.1	44 - 45	7346		72
	XM_005246402.1	XP_005246459.1	44 - 45	7346		72
	XM_005246403.1	XP_005246460.1	42 - 43	7244		72
	XM_005246404.1	XP_005246461.1	42 - 43	7241		72
	XM_005246405.1	XP_005246462.1	42 - 43	7244		72
	XM_005246406.1	XP_005246463.1	42 - 43	7241		72
	XM_005246407.1	XP_005246464.1	43 - 44	7154		72
	XM_005246408.1	XP_005246465.1	43 - 44	7151		72
	XM_005246409.1	XP_005246466.1	42 - 43	7166		72
	XM_005246410.1	XP_005246467.1	43 - 44	7076		72
	XM_005246411.1	XP_005246468.1	42 - 43	6884		72
	XM_005246412.1	XP_005246469.1	41 - 42	6896		72
	XM_005246414.1	XP_005246471.1	42 - 43	6881		72
	XM_005246416.1	XP_005246473.1	42 - 43	6803		72
	XM_017003692.1	XP_016859181.1	43 - 44	7154		72
	XM_017003693.1	XP_016859182.1	43 - 44	7151		72
	XM_017003694.1	XP_016859183.1	43 - 44	7076		72
	XM_017003695.1	XP_016859184.1	41 - 42	6971		72
GenBank mRNA	AB191261.1	-	42 - 43			72
	AB209287.1	-	19 - 20			72
	AB209840.1	-	42 - 43	6771		72
	AF130095.1	-	7 - 8	1078		72
	AJ320525.1	-	8 - 9			72
	AJ320526.1	-	7 - 8			72
	AJ320527.1	-	8 - 9			72
	AK297733.1	-	9 - 10	1196		72
	AK300216.1	-	4 - 5	775		72
	AK300246.1	-	18 - 19			72
	AK300458.1	-	21 - 22			72
	AK316350.1	-	6 - 7	833		72
	AL832202.1	-	41 - 42	6513		72
	AL832771.1	-	41 - 42	6513		72
	BC005858.2	-	3 - 4	352		72
	BC016875.2	-	4 - 5			72
	BC117176.1	-	41 - 42	6492	40125727	72
	BC143754.1	-	42 - 43	6684	9052268	72
	BC143763.1	-	41 - 42	6492	9052277	72
	BT006856.1	-	2 - 3	207		72
	BX537590.1	-	44 - 45	7324		72
	BX538017.1	-	43 - 44	7050		72
	BX538018.1	-	43 - 44	7050		72
	BX640608.1	-	41 - 42	6872		72
	BX640638.1	-	19 - 20			72
	BX640731.1	-	43 - 44	7050		72
	BX640802.1	-	43 - 44	6973		72
	BX640803.1	-	43 - 44	7416		72
	BX640875.1	-	43 - 44			72
	BX640920.1	-	23 - 24	3485		72
	BX640999.1	-	39 - 40	6298		72
	BX641150.1	-	17 - 18	8151		72
	BX649182.1	-	43 - 44	6973		72
	CR749281.1	-	42 - 43	6818		72
	CR749316.1	-	42 - 43	6784		72
	CR749317.1	-	42 - 43			72
	CR749666.1	-	23 - 24	3664		72
	CR936623.1	-	20 - 21			72
	M10905.1	-	12 - 13			72
	U42456.1	-	2 - 3			72
	U42592.1	-	2 - 3			72
	X02761.1	-	43 - 44			72

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200015650.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02002747.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene FN1

Panther Classification:

Molecular Function -

extracellular matrix structural protein

Gene Ontology Categories:

Process(es)

angiogenesis
cell activation
regulation of protein phosphorylation
platelet degranulation
response to ischemia
acute-phase response
cell-substrate junction assembly
cell adhesion
calcium-independent cell-matrix adhesion
positive regulation of cell proliferation
glial cell migration
regulation of cell shape
response to wounding
response to ozone
positive regulation of gene expression
positive regulation of peptidase activity
peptide cross-linking
extracellular matrix disassembly
extracellular matrix organization
integrin activation
substrate adhesion-dependent cell spreading
cellular response to vascular endothelial growth factor stimulus
endodermal cell differentiation
cellular response to platelet-derived growth factor stimulus
wound healing
negative regulation of apoptotic process
positive regulation of axon extension
positive regulation of fibroblast proliferation
leukocyte migration
positive regulation of chemotaxis
response to glucocorticoid
regulation of ERK1 and ERK2 cascade
cellular response to lipopolysaccharide
cellular response to mercury ion
cellular response to glucose stimulus
cellular response to interleukin-1
cellular response to prostaglandin E stimulus
cellular response to transforming growth factor beta stimulus
cellular response to BMP stimulus
positive regulation of substrate-dependent cell migration, cell attachment to substrate
negative regulation of transforming growth factor-beta secretion

Function(s)

protease binding
integrin binding
protein binding
collagen binding
heparin binding
peptidase activator activity
identical protein binding
mercury ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	TC02002747.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000265313.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000323926.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000336916.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000345488.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000346544.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000354785.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000356005.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000357009.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000357867.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000359671.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000421182.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000432072.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000443816.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	ENST00000446046.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	NM_002026.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	NM_212474.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	NM_212476.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	NM_212478.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02044118.hg.1	NM_212482.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000323926.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000336916.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000354785.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000356005.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000357867.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000359671.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000421182.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000432072.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000443816.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000446046.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000456923.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000469569.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000473614.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000492816.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000494446.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_001306129.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_001306130.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_001306131.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_001306132.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_002026.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_212474.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_212476.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_212478.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_212482.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000323926.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000336916.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000354785.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000356005.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000357867.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000359671.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000421182.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000432072.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000443816.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000446046.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000456923.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000469569.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000473614.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000492816.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	ENST00000494446.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_001306129.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_001306130.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_001306131.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_001306132.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_002026.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_212474.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_212476.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_212478.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	NM_212482.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200214815.hg.1	TC0200015650.hg.1	Clariom D TC