Hs01554248_m1

• Gene Symbol: TRRAP
• Gene Name: transformation/transcription domain associated protein
• Gene Aliases: PAF350/400, PAF400, STAF40, TR-AP, Tra1
• Chromosome Location: Chr.7: 98878490 - 99013243 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TRRAP
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001244580.1	NP_001231509.1	51 - 52	7871		65
	NM_003496.3	NP_003487.1	50 - 51	7817		65
GenBank mRNA	AB209489.1	-	42 - 43	6827		65
	AF076974.1	-	50 - 51	7817		65
	AF110377.1	-	51 - 52	7791		65

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700013413.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07003396.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TRRAP

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase, protein modifying enzyme

Gene Ontology Categories:

Process(es)

DNA repair
transcription, DNA-templated
regulation of transcription, DNA-templated
phosphorylation
histone acetylation
histone deubiquitination
histone H4 acetylation
histone H2A acetylation
beta-catenin-TCF complex assembly

Function(s)

transcription cofactor activity
protein binding
kinase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07008599.hg.1	TC07003396.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07008599.hg.1	ENST00000355540.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07008599.hg.1	ENST00000359863.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07008599.hg.1	ENST00000446306.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07008599.hg.1	NM_001244580.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07008599.hg.1	NM_003496.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	ENST00000355540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	ENST00000359863.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	ENST00000446306.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	ENST00000456197.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	ENST00000628380.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	NM_001244580.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	NM_003496.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	ENST00000355540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	ENST00000359863.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	ENST00000446306.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	ENST00000456197.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	ENST00000628380.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	NM_001244580.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	NM_003496.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700197879.hg.1	TC0700013413.hg.1	Clariom D TC