CDKAL1
Genomic Map
Back To TopAssay Details
| Gene Symbol: CDKAL1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_017774.3 | NP_060244.2 | 5 - 6 | 542 | 71 | |
| XM_011514718.1 | XP_011513020.1 | 5 - 6 | 542 | 71 | ||
| XM_011514719.2 | XP_011513021.1 | 5 - 6 | 542 | 71 | ||
| XM_017010986.1 | XP_016866475.1 | 5 - 6 | 542 | 71 | ||
| XM_017010987.1 | XP_016866476.1 | 5 - 6 | 539 | 71 | ||
| GenBank mRNA | AK000349.1 | - | 5 - 6 | 480 | 71 | |
| AK128546.1 | - | 4 - 5 | 429 | 71 | ||
| AK291735.1 | - | 5 - 6 | 522 | 71 | ||
| BC121020.1 | - | 5 - 6 | 472 | 40117357 | 71 | |
| BC121021.1 | - | 5 - 6 | 472 | 40117363 | 71 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0600007143.hg.1This assay targets the same location as HTA transcript cluster(s) TC06000132.hg.1
Additional Information:
This assay is in the 5'UTR region of the XM_017010987.1 transcripts.
Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Mammalian Gene Collection
Homo sapiens
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
tRNA modification
biological_process
tRNA methylthiolation
maintenance of translational fidelity
molecular_function
protein binding
N6-threonylcarbomyladenosine methylthiotransferase activity
metal ion binding
4 iron, 4 sulfur cluster binding
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
tRNA modification
biological_process
tRNA methylthiolation
maintenance of translational fidelity
molecular_function
protein binding
N6-threonylcarbomyladenosine methylthiotransferase activity
metal ion binding
4 iron, 4 sulfur cluster binding
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
MicroArray Probes:
Affymetrix
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR06001330.hg.1 | TC06000132.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001330.hg.1 | ENST00000274695.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001330.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001330.hg.1 | ENST00000378624.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001330.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001329.hg.1 | TC06000132.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001329.hg.1 | ENST00000274695.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001329.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001329.hg.1 | ENST00000378624.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001329.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001328.hg.1 | TC06000132.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001328.hg.1 | ENST00000274695.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001328.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001328.hg.1 | ENST00000378624.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR06001328.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000476517.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000476517.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000476517.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000476517.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000476517.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600148600.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148600.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148600.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600148600.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148600.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148600.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600148600.hg.1 | TC0600007143.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000476517.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000476517.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000476517.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000476517.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000476517.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | ENST00000613575.4 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | TC0600007143.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600148599.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148599.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148599.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600148599.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148599.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148599.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600148599.hg.1 | TC0600007143.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0600148601.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148601.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148601.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600148601.hg.1 | ENST00000274695.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148601.hg.1 | ENST00000378610.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0600148601.hg.1 | NM_017774.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0600148601.hg.1 | TC0600007143.hg.1 | Clariom D TC |
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