Hs01555346_m1

• Gene Symbol: SP100
• Gene Name: SP100 nuclear antigen
• Gene Aliases: lysp100b
• Chromosome Location: Chr.2: 230416156 - 230545602 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SP100
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001206704.1	NP_001193633.1	3 - 4	289		146
GenBank mRNA	AK091898.1	-	3 - 4	289		146

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200011023.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02001377.hg.1

Additional Information:

This assay is in the 5'UTR region of the NM_001206704.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
telomere maintenance
transcription, DNA-templated
inflammatory response
DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
negative regulation of endothelial cell migration
viral process
protein sumoylation
response to type I interferon
response to interferon-gamma
negative regulation of DNA binding
negative regulation of sequence-specific DNA binding transcription factor activity
regulation of angiogenesis
positive regulation of transcription, DNA-templated
negative regulation of protein export from nucleus
negative regulation of cellular component movement
interferon-gamma-mediated signaling pathway
type I interferon signaling pathway
regulation of extrinsic apoptotic signaling pathway via death domain receptors
regulation of Fas signaling pathway

Function(s)

DNA binding
transcription coactivator activity
transcription corepressor activity
cytokine activity
protein binding
kinase binding
protein domain specific binding
protein homodimerization activity
chromo shadow domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	TC02001377.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	ENST00000264052.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	ENST00000340126.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	ENST00000341950.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	ENST00000409112.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	ENST00000409341.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	ENST00000409824.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	ENST00000409897.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	ENST00000414648.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	ENST00000427101.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	NM_001080391.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	NM_001206701.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	NM_001206702.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	NM_001206703.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	NM_001206704.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02021556.hg.1	NM_003113.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000264052.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000340126.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000409112.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000409341.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000409824.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000409897.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000427101.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000432979.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_001080391.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_001206701.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_001206702.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_001206703.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_001206704.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_003113.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000264052.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000340126.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000409112.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000409341.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000409824.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000409897.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000427101.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	ENST00000432979.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_001080391.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_001206701.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_001206702.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_001206703.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_001206704.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	NM_003113.3	Refseq
Affymetrix Human Clariom D Assay	PSR0200179046.hg.1	TC0200011023.hg.1	Clariom D TC