Hs01555804_m1

• Gene Symbol: VPS13B
• Gene Name: vacuolar protein sorting 13 homolog B
• Gene Aliases: CHS1, COH1
• Chromosome Location: Chr.8: 99007014 - 99877586 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: VPS13B
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017890.4	NP_060360.3	44 - 45	8272		123
	NM_152564.4	NP_689777.3	44 - 45	8197		123
	XM_005250800.3	XP_005250857.1	44 - 45	8578		123
	XM_005250801.4	XP_005250858.1	44 - 45	14448		123
	XM_011516848.2	XP_011515150.1	44 - 45	8261		123
	XM_011516849.2	XP_011515151.1	44 - 45	8186		123
	XM_011516850.2	XP_011515152.1	42 - 43	7904		123
	XM_011516851.2	XP_011515153.1	24 - 25	5164		123
	XM_011516852.2	XP_011515154.1	24 - 25	5202		123
	XM_011516854.2	XP_011515156.1	20 - 21	4360		123
	XM_017013109.1	XP_016868598.1	43 - 44	8069		123
	XM_017013110.1	XP_016868599.1	37 - 38	7062		123
	XM_017013111.1	XP_016868600.1	24 - 25	5434		123
	XM_017013112.1	XP_016868601.1	21 - 22	4576		123
GenBank mRNA	AB011104.1	-	5 - 6	1006		123
	AJ608772.1	-	44 - 45	8264		123
	AJ608773.1	-	44 - 45	8189		123
	AY223814.1	-	44 - 45	8272		123
	AY223815.1	-	44 - 45	8197		123

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800008352.hg.1
This assay targets the same location as HTA transcript cluster(s) TC08000608.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene VPS13B

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

protein transport

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR08008482.hg.1	TC08000608.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08008482.hg.1	ENST00000357162.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08008482.hg.1	ENST00000358544.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08008482.hg.1	ENST00000395996.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08008482.hg.1	NM_017890.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08008482.hg.1	NM_152564.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800157587.hg.1	ENST00000357162.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0800157587.hg.1	ENST00000358544.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0800157587.hg.1	NM_017890.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800157587.hg.1	NM_152564.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800157587.hg.1	ENST00000357162.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0800157587.hg.1	ENST00000358544.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0800157587.hg.1	NM_017890.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800157587.hg.1	NM_152564.4	Refseq
Affymetrix Human Clariom D Assay	PSR0800157587.hg.1	TC0800008352.hg.1	Clariom D TC