Hs01564013_m1 Best Coverage

• Gene Symbol: ATP2A2
• Gene Name: ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
• Gene Aliases: ATP2B, DAR, DD, SERCA2
• Chromosome Location: Chr.12: 110281227 - 110351093 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ATP2A2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001681.3	NP_001672.1	10 - 11	1855		79
	NM_170665.3	NP_733765.1	10 - 11	1855		79
	XM_005253888.2	XP_005253945.1	10 - 11	1850		79
	XM_011538402.2	XP_011536704.1	10 - 11	1850		79
GenBank mRNA	AK293877.1	-	6 - 7	963		79
	BC035588.1	-	10 - 11	1402	5503508	79
	KU177929.1	-	10 - 11	1292		79
	M23114.1	-	10 - 11	1455		79
	M23115.1	-	10 - 11	1295		79

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200008835.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12000856.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Homo sapiens, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene ATP2A2

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Process(es)

regulation of the force of heart contraction
ER-nucleus signaling pathway
organelle organization
cell adhesion
epidermis development
positive regulation of heart rate
regulation of cardiac muscle contraction by calcium ion signaling
transition between fast and slow fiber
endoplasmic reticulum calcium ion homeostasis
positive regulation of endoplasmic reticulum calcium ion concentration
T-tubule organization
ion transmembrane transport
cellular response to oxidative stress
response to endoplasmic reticulum stress
response to peptide hormone
negative regulation of heart contraction
relaxation of cardiac muscle
sarcoplasmic reticulum calcium ion transport
calcium ion transmembrane transport
regulation of cardiac muscle cell membrane potential
regulation of cardiac muscle cell action potential involved in regulation of contraction
regulation of calcium ion-dependent exocytosis of neurotransmitter
calcium ion transport from cytosol to endoplasmic reticulum
regulation of cardiac conduction
calcium ion import into sarcoplasmic reticulum

Function(s)

calcium-transporting ATPase activity
calcium ion binding
protein binding
ATP binding
protein C-terminus binding
enzyme binding
lutropin-choriogonadotropic hormone receptor binding
S100 protein binding
calcium-transporting ATPase activity involved in regulation of cardiac muscle cell membrane potential

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR12011152.hg.1	ENST00000308664.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12011152.hg.1	ENST00000395494.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12011152.hg.1	ENST00000539276.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR12011152.hg.1	NM_001681.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12011152.hg.1	NM_170665.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR12011152.hg.1	TC12000856.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	ENST00000308664.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	ENST00000377685.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	ENST00000539276.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	ENST00000548169.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	ENST00000550262.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	NM_001681.3	Refseq
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	NM_170665.3	Refseq
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	ENST00000308664.10	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	ENST00000377685.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	ENST00000539276.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	ENST00000548169.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	ENST00000550262.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	NM_001681.3	Refseq
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	NM_170665.3	Refseq
Affymetrix Human Clariom D Assay	PSR1200165481.hg.1	TC1200008835.hg.1	Clariom D TC