Hs01566181_m1

• Gene Symbol: SLF1
• Gene Name: SMC5-SMC6 complex localization factor 1
• Gene Aliases: ANKRD32, BRCTD1, BRCTx
• Chromosome Location: Chr.5: 94613477 - 94697733 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SLF1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_032290.3	NP_115666.2	5 - 6	667		146
	XM_017009978.1	XP_016865467.1	5 - 6	848		146
	XM_017009979.1	XP_016865468.1	5 - 6	5429		146
	XM_017009980.1	XP_016865469.1	5 - 6	849		146
	XM_017009981.1	XP_016865470.1	5 - 6	699		146
	XM_017009982.1	XP_016865471.1	5 - 6	848		146
GenBank mRNA	AK299080.1	-	5 - 6	693		146
	AL050298.1	-	5 - 6	672		146
	BC054885.1	-	5 - 6	669		146
	BC070332.1	-	5 - 6	705		146
	BC107571.1	-	5 - 6	667		146
	CR936768.1	-	5 - 6	673		146

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500008107.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05000453.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SLF1

Gene Ontology Categories:

Process(es)

DNA repair
cellular response to DNA damage stimulus
positive regulation of protein complex assembly
positive regulation of maintenance of mitotic sister chromatid cohesion
protein localization to site of double-strand break
positive regulation of double-strand break repair

Function(s)

protein binding
ubiquitin protein ligase binding
protein complex binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05006396.hg.1	TC05000453.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05006396.hg.1	ENST00000265140.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05006396.hg.1	NM_032290.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500155465.hg.1	ENST00000265140.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500155465.hg.1	ENST00000508130.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500155465.hg.1	NM_032290.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500155465.hg.1	ENST00000265140.9	Ensembl
Affymetrix Human Clariom D Assay	PSR0500155465.hg.1	ENST00000508130.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500155465.hg.1	NM_032290.3	Refseq
Affymetrix Human Clariom D Assay	PSR0500155465.hg.1	TC0500008107.hg.1	Clariom D TC