Hs01569384_m1

• Gene Symbol: VPS13C
• Gene Name: vacuolar protein sorting 13 homolog C
• Gene Aliases: PARK23
• Chromosome Location: Chr.15: 61852389 - 62060465 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: VPS13C
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001018088.2	NP_001018098.1	30 - 31	3140		156
	NM_017684.4	NP_060154.3	28 - 29	3011		156
	NM_018080.3	NP_060550.2	28 - 29	3011		156
	NM_020821.2	NP_065872.1	30 - 31	3140		156
	XM_011521713.2	XP_011520015.1	30 - 31	3101		156
	XM_011521714.2	XP_011520016.1	30 - 31	3101		156
GenBank mRNA	AB037842.1	-	30 - 31	3123		156
	AJ608770.1	-	28 - 29	2994		156
	AJ608771.1	-	30 - 31	3123		156
	AJ626860.1	-	28 - 29	2994		156
	AJ626861.1	-	30 - 31	3123		156
	AK025364.1	-	25 - 26	2662		156

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1500009669.hg.1
This assay targets the same location as HTA transcript cluster(s) TC15001510.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene VPS13C

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

protein targeting to vacuole
Golgi to endosome transport
mitochondrion organization
protein retention in Golgi apparatus
negative regulation of parkin-mediated mitophagy in response to mitochondrial depolarization

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR15014358.hg.1	ENST00000249837.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR15014358.hg.1	ENST00000261517.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR15014358.hg.1	ENST00000395896.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR15014358.hg.1	ENST00000395898.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR15014358.hg.1	NM_001018088.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR15014358.hg.1	NM_017684.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR15014358.hg.1	NM_018080.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR15014358.hg.1	NM_020821.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR15014358.hg.1	TC15001510.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	ENST00000249837.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	ENST00000261517.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	ENST00000395896.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	ENST00000395898.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	NM_001018088.2	Refseq
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	NM_017684.4	Refseq
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	NM_018080.3	Refseq
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	NM_020821.2	Refseq
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	ENST00000249837.7	Ensembl
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	ENST00000261517.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	ENST00000395896.8	Ensembl
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	ENST00000395898.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	NM_001018088.2	Refseq
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	NM_017684.4	Refseq
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	NM_018080.3	Refseq
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	NM_020821.2	Refseq
Affymetrix Human Clariom D Assay	PSR1500171332.hg.1	TC1500009669.hg.1	Clariom D TC