Hs01571733_s1

• Gene Symbol: PCDHGB8P
• Gene Name: protocadherin gamma subfamily B, 8 pseudogene
• Gene Aliases: PCDH-PSI3
• Chromosome Location: Chr.5: 141426286 - 141428258 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PCDHGB8P
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_001297.1		1	1033		110

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AF152529.3	-	1	1033		Chr. 5 - 141426286 - 141428258 [+] on Build GRCh38	110

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	protocadherin gamma subfamily A, 1	PCDHGA1	PCDH-GAMMA-A1		Sense	Chr. 5 - 141330685 - 141512979 on NCBI Build GRCh38
Downstream	protocadherin gamma subfamily A, 12	PCDHGA12	CDH21, FIB3, PCDH-GAMMA-A12	2.3kb	Sense	Chr. 5 - 141430591 - 141512979 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500008891.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05000768.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500008891.hg.1	ENST00000502926.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500008891.hg.1	ENST00000507007.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500008891.hg.1	ENST00000507007.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500008891.hg.1	NR_001297.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500012277.hg.1	ENST00000624928.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010958.hg.1	TC05000768.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05010958.hg.1	ENST00000502926.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05010958.hg.1	NR_001297.1	Refseq
Affymetrix Human Clariom D Assay	TC0500012277.hg.1	ENST00000624928.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500162022.hg.1	ENST00000502926.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500162022.hg.1	ENST00000507007.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500162022.hg.1	NR_001297.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500162022.hg.1	ENST00000502926.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500162022.hg.1	ENST00000507007.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500162022.hg.1	NR_001297.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500162022.hg.1	TC0500008891.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500008891.hg.1	ENST00000502926.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500008891.hg.1	ENST00000507007.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500008891.hg.1	ENST00000507007.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500008891.hg.1	NR_001297.1	Refseq