Hs01574709_m1

• Gene Symbol: UBR4
• Gene Name: ubiquitin protein ligase E3 component n-recognin 4
• Gene Aliases: RBAF600, ZUBR1, p600
• Chromosome Location: Chr.1: 19074506 - 19210334 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: UBR4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_020765.2	NP_065816.2	88 - 89	13028		65
	XM_011541108.2	XP_011539410.1	90 - 91	13263		65
	XM_011541109.2	XP_011539411.1	90 - 91	13260		65
	XM_011541110.2	XP_011539412.1	90 - 91	13260		65
	XM_011541111.2	XP_011539413.1	90 - 91	13260		65
	XM_011541112.2	XP_011539414.1	90 - 91	13248		65
	XM_011541113.2	XP_011539415.1	90 - 91	13245		65
	XM_011541114.2	XP_011539416.1	90 - 91	13245		65
	XM_011541115.2	XP_011539417.1	90 - 91	13239		65
	XM_011541116.2	XP_011539418.1	89 - 90	13230		65
	XM_011541117.2	XP_011539419.1	89 - 90	13179		65
	XM_011541118.2	XP_011539420.1	89 - 90	13176		65
	XM_011541119.2	XP_011539421.1	90 - 91	13263		65
	XM_011541120.2	XP_011539422.1	89 - 90	13140		65
	XM_011541121.2	XP_011539423.1	88 - 89	13107		65
	XM_017000822.1	XP_016856311.1	90 - 91	13242		65
	XM_017000823.1	XP_016856312.1	89 - 90	13215		65
	XM_017000824.1	XP_016856313.1	89 - 90	13161		65
	XM_017000825.1	XP_016856314.1	88 - 89	13146		65
	XM_017000826.1	XP_016856315.1	89 - 90	13143		65
	XM_017000827.1	XP_016856316.1	88 - 89	13128		65
	XM_017000828.1	XP_016856317.1	88 - 89	13104		65
	XM_017000829.1	XP_016856318.1	88 - 89	13056		65
	XM_017000830.1	XP_016856319.1	87 - 88	13005		65
GenBank mRNA	AB007931.1	-	29 - 30	4304		65
	AF348492.1	-	88 - 89	13024		65
	AK022573.1	-	1 - 2	50		65
	AK023826.1	-	26 - 27	3859		65
	AK025149.1	-	5 - 6	546		65
	AK123857.1	-	3 - 4	629		65
	AK302623.1	-	1 - 2	109		65

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100013123.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01002293.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK022573.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Homo sapiens, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene UBR4

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
viral process

Function(s)

ubiquitin-protein transferase activity
protein binding
calmodulin binding
zinc ion binding
ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01035009.hg.1	ENST00000375217.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01035009.hg.1	ENST00000375224.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01035009.hg.1	ENST00000375226.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01035009.hg.1	ENST00000375254.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01035009.hg.1	ENST00000375267.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01035009.hg.1	ENST00000543981.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01035009.hg.1	NM_020765.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01035009.hg.1	TC01002293.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0100196992.hg.1	ENST00000375224.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100196992.hg.1	ENST00000375254.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100196992.hg.1	NM_020765.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100196992.hg.1	TC0100013123.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100196992.hg.1	ENST00000375224.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100196992.hg.1	ENST00000375254.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100196992.hg.1	NM_020765.2	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	155235	-	-