Hs01591135_g1

• Gene Symbol: TRRAP
• Gene Name: transformation/transcription domain associated protein
• Gene Aliases: PAF350/400, PAF400, STAF40, TR-AP, Tra1
• Chromosome Location: Chr.7: 98878490 - 99013243 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TRRAP
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001244580.1	NP_001231509.1	49 - 50	7485		155
	NM_003496.3	NP_003487.1	48 - 49	7431		155
GenBank mRNA	AB209489.1	-	40 - 41	6441		155
	AF076974.1	-	48 - 49	7431		155
	AF110377.1	-	49 - 50	7405		155

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700013413.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07003396.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TRRAP

Gene Ontology Categories:

Process(es)

DNA repair
transcription, DNA-templated
regulation of transcription, DNA-templated
phosphorylation
histone acetylation
histone deubiquitination
histone H4 acetylation
histone H2A acetylation
beta-catenin-TCF complex assembly

Function(s)

transcription coregulator activity
protein binding
kinase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07008597.hg.1	ENST00000355540.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07008597.hg.1	ENST00000359863.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07008597.hg.1	ENST00000446306.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07008597.hg.1	NM_001244580.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07008597.hg.1	NM_003496.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07008597.hg.1	TC07003396.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	ENST00000355540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	ENST00000359863.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	ENST00000446306.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	ENST00000456197.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	ENST00000628380.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	NM_001244580.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	NM_003496.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	TC0700013413.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	ENST00000355540.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	ENST00000359863.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	ENST00000446306.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	ENST00000456197.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	ENST00000628380.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	NM_001244580.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700197875.hg.1	NM_003496.3	Refseq