Hs01597779_g1

• Gene Symbol: APOM
• Gene Name: apolipoprotein M
• Gene Aliases: G3a, HSPC336, NG20, apo-M
• Chromosome Location: Chr.6: 31652410 - 31658210 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: APOM
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001256169.1	NP_001243098.1	4 - 5	465		141
	NM_019101.2	NP_061974.2	4 - 5	510		141
	NR_045828.1		4 - 5	472		141
	XM_006715150.3	XP_006715213.1	4 - 5	494		141
GenBank mRNA	AA846749.1	-	2 - 3			141
	AF118393.3	-	4 - 5	470		141
	AF161454.1	-	4 - 5	431		141
	AJ245434.1	-	4 - 5	486		141
	BC020683.1	-	4 - 5	489	4733993	141
	BF344944.1	-	4 - 5	444		140
	CB054016.1	-	4 - 5	472		141
	CN428415.1	-	4 - 5	452		141

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600007602.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000377.hg.1, TC6_cox_hap2000072.hg.1, TC6_dbb_hap3000063.hg.1, TC6_mann_hap4000063.hg.1, TC6_mcf_hap5000058.hg.1, TC6_qbl_hap6000063.hg.1, TC6_ssto_hap7000059.hg.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Transporter, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene APOM

Panther Classification:

Molecular Function -

apolipoprotein, transfer/carrier protein

Gene Ontology Categories:

Process(es)

retinoid metabolic process
response to glucose
cholesterol efflux
high-density lipoprotein particle remodeling
high-density lipoprotein particle assembly
high-density lipoprotein particle clearance
negative regulation of plasma lipoprotein particle oxidation
lipoprotein metabolic process
cholesterol homeostasis
reverse cholesterol transport
cellular oxidant detoxification

Function(s)

lipid transporter activity
phospholipid binding
antioxidant activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7000888.hg.1	TC6_ssto_hap7000059.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7000888.hg.1	NM_001256169.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7000888.hg.1	NM_019101.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7000888.hg.1	NR_045828.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001040.hg.1	TC6_dbb_hap3000063.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001040.hg.1	NM_001256169.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001040.hg.1	NM_019101.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3001040.hg.1	NR_045828.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001031.hg.1	TC6_mann_hap4000063.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001031.hg.1	NM_001256169.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001031.hg.1	NM_019101.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4001031.hg.1	NR_045828.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001097.hg.1	TC6_cox_hap2000072.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001097.hg.1	NM_001256169.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001097.hg.1	NM_019101.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2001097.hg.1	NR_045828.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5000912.hg.1	TC6_mcf_hap5000058.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5000912.hg.1	NM_001256169.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5000912.hg.1	NM_019101.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5000912.hg.1	NR_045828.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06003738.hg.1	TC06000377.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06003738.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06003738.hg.1	ENST00000375918.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06003738.hg.1	ENST00000375920.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06003738.hg.1	NM_001256169.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06003738.hg.1	NM_019101.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06003738.hg.1	NR_045828.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001078.hg.1	TC6_qbl_hap6000063.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001078.hg.1	NM_001256169.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001078.hg.1	NM_019101.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6001078.hg.1	NR_045828.1	Refseq
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Clariom D Assay	TC0600007602.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151909.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151909.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151909.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151909.hg.1	ENST00000375916.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151909.hg.1	ENST00000375918.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151909.hg.1	ENST00000375920.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600151909.hg.1	TC0600007602.hg.1	Clariom D TC