Hs01634263_s1

• Gene Symbol: TDG
• Gene Name: thymine DNA glycosylase
• Gene Aliases: hTDG
• Chromosome Location: Chr.12: 103965815 - 103988878 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TDG
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_003211.4	NP_003202.3	1	65		121
GenBank mRNA	AL710869.1	-	1	59		121
	DB162106.1	-	1	65		121

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200008669.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12000804.hg.1

Additional Information:

This assay is in the 5'UTR region of the NM_003211.4 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TDG

Panther Classification:

Molecular Function -

DNA metabolism protein, DNA glycosylase, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
base-excision repair
base-excision repair, AP site formation
mismatch repair
transcription, DNA-templated
embryo development
covalent chromatin modification
protein sumoylation
negative regulation of protein binding
oxidative DNA demethylation
negative regulation of chromatin binding
regulation of gene expression, epigenetic
depyrimidination
DNA demethylation

Function(s)

RNA polymerase II transcription cofactor activity
damaged DNA binding
double-stranded DNA binding
uracil DNA N-glycosylase activity
protein kinase C binding
protein binding
pyrimidine-specific mismatch base pair DNA N-glycosylase activity
DNA N-glycosylase activity
mismatched DNA binding
SUMO binding
protein homodimerization activity
structure-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200007115.hg.1	ENST00000543961.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000266775.13	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000392872.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000401157.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000436021.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000436021.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000436021.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000436021.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000436021.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000436021.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000436021.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000536395.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000536395.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000536395.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000537100.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000537100.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000537100.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000537100.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000537100.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000537100.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000537100.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000537100.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000537100.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000540956.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000542926.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544060.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544060.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544060.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544060.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544060.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544060.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544060.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000544861.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000545698.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000545698.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000545698.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000545698.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	ENST00000545698.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200008669.hg.1	NM_003211.4	Refseq
Affymetrix Human Clariom D Assay	TC1200007115.hg.1	ENST00000543961.1	Ensembl